Gene : Thecc1EG006379 T. cacao v1.1
Defline:  (1 of 1) PTHR32285:SF23 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 12 Genomic Order:  356
Name:  ? Thecc1EG006379 Secondary Identifier:  ? PAC:27465016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006379 0.5kb upstream 0.5kb upstream 3443 true scaffold_2: 1962336-1965778 Theobroma cacao
Thecc1EG006379 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1965279-1965778 Theobroma cacao
Thecc1EG006379 0.5kb downstream 0.5kb downstream 3443 true scaffold_2: 1961836-1965278 Theobroma cacao
Thecc1EG006379 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1961836-1962335 Theobroma cacao
Thecc1EG006379 1.0kb upstream 1.0kb upstream 3943 true scaffold_2: 1962336-1966278 Theobroma cacao
Thecc1EG006379 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1965279-1966278 Theobroma cacao
Thecc1EG006379 1.0kb downstream 1.0kb downstream 3943 true scaffold_2: 1961336-1965278 Theobroma cacao
Thecc1EG006379 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1961336-1962335 Theobroma cacao
Thecc1EG006379 2.0kb upstream 2.0kb upstream 4943 true scaffold_2: 1962336-1967278 Theobroma cacao
Thecc1EG006379 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1965279-1967278 Theobroma cacao
Thecc1EG006379 2.0kb downstream 2.0kb downstream 4943 true scaffold_2: 1960336-1965278 Theobroma cacao
Thecc1EG006379 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1960336-1962335 Theobroma cacao
Thecc1EG006379 5.0kb upstream 5.0kb upstream 7943 true scaffold_2: 1962336-1970278 Theobroma cacao
Thecc1EG006379 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1965279-1970278 Theobroma cacao
Thecc1EG006379 5.0kb downstream 5.0kb downstream 7943 true scaffold_2: 1957336-1965278 Theobroma cacao
Thecc1EG006379 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1957336-1962335 Theobroma cacao
Thecc1EG006379 10.0kb upstream 10.0kb upstream 12943 true scaffold_2: 1962336-1975278 Theobroma cacao
Thecc1EG006379 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1965279-1975278 Theobroma cacao
Thecc1EG006379 10.0kb downstream 10.0kb downstream 12943 true scaffold_2: 1952336-1965278 Theobroma cacao
Thecc1EG006379 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1952336-1962335 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830851 5264 Brassicales-Malvales View MSA
124338206 5266 SBM View MSA
124249866 5268 Malvidae View MSA
124066709 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain