Gene : Thecc1EG006345 T. cacao v1.1
Defline:  (1 of 4) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  324
Name:  ? Thecc1EG006345 Secondary Identifier:  ? PAC:27463132
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006345 0.5kb upstream 0.5kb upstream 3845 true scaffold_2: 1773575-1777419 Theobroma cacao
Thecc1EG006345 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1776920-1777419 Theobroma cacao
Thecc1EG006345 0.5kb downstream 0.5kb downstream 3845 true scaffold_2: 1773075-1776919 Theobroma cacao
Thecc1EG006345 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1773075-1773574 Theobroma cacao
Thecc1EG006345 1.0kb upstream 1.0kb upstream 4345 true scaffold_2: 1773575-1777919 Theobroma cacao
Thecc1EG006345 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1776920-1777919 Theobroma cacao
Thecc1EG006345 1.0kb downstream 1.0kb downstream 4345 true scaffold_2: 1772575-1776919 Theobroma cacao
Thecc1EG006345 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1772575-1773574 Theobroma cacao
Thecc1EG006345 2.0kb upstream 2.0kb upstream 5345 true scaffold_2: 1773575-1778919 Theobroma cacao
Thecc1EG006345 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1776920-1778919 Theobroma cacao
Thecc1EG006345 2.0kb downstream 2.0kb downstream 5345 true scaffold_2: 1771575-1776919 Theobroma cacao
Thecc1EG006345 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1771575-1773574 Theobroma cacao
Thecc1EG006345 5.0kb upstream 5.0kb upstream 8345 true scaffold_2: 1773575-1781919 Theobroma cacao
Thecc1EG006345 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1776920-1781919 Theobroma cacao
Thecc1EG006345 5.0kb downstream 5.0kb downstream 8345 true scaffold_2: 1768575-1776919 Theobroma cacao
Thecc1EG006345 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1768575-1773574 Theobroma cacao
Thecc1EG006345 10.0kb upstream 10.0kb upstream 13345 true scaffold_2: 1773575-1786919 Theobroma cacao
Thecc1EG006345 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1776920-1786919 Theobroma cacao
Thecc1EG006345 10.0kb downstream 10.0kb downstream 13345 true scaffold_2: 1763575-1776919 Theobroma cacao
Thecc1EG006345 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1763575-1773574 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825356 5264 Brassicales-Malvales View MSA
124347074 5266 SBM View MSA
124245295 5268 Malvidae View MSA
124069864 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain