Gene : Thecc1EG006330 T. cacao v1.1

Defline:  (1 of 1) PF15370 - Domain of unknown function (DUF4598) (DUF4598) Genomic Order:  310
Name:  ? Thecc1EG006330 Secondary Identifier:  ? PAC:27462325

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006330 0.5kb upstream 0.5kb upstream 1983 true scaffold_2: 1723659-1725641 Theobroma cacao
Thecc1EG006330 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1723659-1724158 Theobroma cacao
Thecc1EG006330 0.5kb downstream 0.5kb downstream 1983 true scaffold_2: 1724159-1726141 Theobroma cacao
Thecc1EG006330 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1725642-1726141 Theobroma cacao
Thecc1EG006330 1.0kb upstream 1.0kb upstream 2483 true scaffold_2: 1723159-1725641 Theobroma cacao
Thecc1EG006330 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1723159-1724158 Theobroma cacao
Thecc1EG006330 1.0kb downstream 1.0kb downstream 2483 true scaffold_2: 1724159-1726641 Theobroma cacao
Thecc1EG006330 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1725642-1726641 Theobroma cacao
Thecc1EG006330 2.0kb upstream 2.0kb upstream 3483 true scaffold_2: 1722159-1725641 Theobroma cacao
Thecc1EG006330 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1722159-1724158 Theobroma cacao
Thecc1EG006330 2.0kb downstream 2.0kb downstream 3483 true scaffold_2: 1724159-1727641 Theobroma cacao
Thecc1EG006330 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1725642-1727641 Theobroma cacao
Thecc1EG006330 5.0kb upstream 5.0kb upstream 6483 true scaffold_2: 1719159-1725641 Theobroma cacao
Thecc1EG006330 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1719159-1724158 Theobroma cacao
Thecc1EG006330 5.0kb downstream 5.0kb downstream 6483 true scaffold_2: 1724159-1730641 Theobroma cacao
Thecc1EG006330 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1725642-1730641 Theobroma cacao
Thecc1EG006330 10.0kb upstream 10.0kb upstream 11483 true scaffold_2: 1714159-1725641 Theobroma cacao
Thecc1EG006330 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1714159-1724158 Theobroma cacao
Thecc1EG006330 10.0kb downstream 10.0kb downstream 11483 true scaffold_2: 1724159-1735641 Theobroma cacao
Thecc1EG006330 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1725642-1735641 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828618 5264 Brassicales-Malvales View MSA
124342485 5266 SBM View MSA
124239178 5268 Malvidae View MSA
124050437 5270 Rosid View MSA
123745056 5271 Pentapetalae View MSA
122789352 5272 Eudicot View MSA
122046773 5273 Angiosperm View MSA
121350324 5274 Embryophyte View MSA
123426876 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain