Gene : Thecc1EG006329 T. cacao v1.1

Defline:  (1 of 1) PTHR31062:SF37 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 10-RELATED Genomic Order:  309
Name:  ? Thecc1EG006329 Secondary Identifier:  ? PAC:27459924

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006329 0.5kb upstream 0.5kb upstream 2146 true scaffold_2: 1721498-1723643 Theobroma cacao
Thecc1EG006329 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1721498-1721997 Theobroma cacao
Thecc1EG006329 0.5kb downstream 0.5kb downstream 2146 true scaffold_2: 1721998-1724143 Theobroma cacao
Thecc1EG006329 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1723644-1724143 Theobroma cacao
Thecc1EG006329 1.0kb upstream 1.0kb upstream 2646 true scaffold_2: 1720998-1723643 Theobroma cacao
Thecc1EG006329 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1720998-1721997 Theobroma cacao
Thecc1EG006329 1.0kb downstream 1.0kb downstream 2646 true scaffold_2: 1721998-1724643 Theobroma cacao
Thecc1EG006329 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1723644-1724643 Theobroma cacao
Thecc1EG006329 2.0kb upstream 2.0kb upstream 3646 true scaffold_2: 1719998-1723643 Theobroma cacao
Thecc1EG006329 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1719998-1721997 Theobroma cacao
Thecc1EG006329 2.0kb downstream 2.0kb downstream 3646 true scaffold_2: 1721998-1725643 Theobroma cacao
Thecc1EG006329 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1723644-1725643 Theobroma cacao
Thecc1EG006329 5.0kb upstream 5.0kb upstream 6646 true scaffold_2: 1716998-1723643 Theobroma cacao
Thecc1EG006329 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1716998-1721997 Theobroma cacao
Thecc1EG006329 5.0kb downstream 5.0kb downstream 6646 true scaffold_2: 1721998-1728643 Theobroma cacao
Thecc1EG006329 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1723644-1728643 Theobroma cacao
Thecc1EG006329 10.0kb upstream 10.0kb upstream 11646 true scaffold_2: 1711998-1723643 Theobroma cacao
Thecc1EG006329 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1711998-1721997 Theobroma cacao
Thecc1EG006329 10.0kb downstream 10.0kb downstream 11646 true scaffold_2: 1721998-1733643 Theobroma cacao
Thecc1EG006329 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1723644-1733643 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827506 5264 Brassicales-Malvales View MSA
124341849 5266 SBM View MSA
124239964 5268 Malvidae View MSA
124063882 5270 Rosid View MSA
123746772 5271 Pentapetalae View MSA
122790854 5272 Eudicot View MSA
122043588 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain