Gene : Thecc1EG006325 T. cacao v1.1
Defline:  (1 of 4) PTHR11945//PTHR11945:SF164 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  305
Name:  ? Thecc1EG006325 Secondary Identifier:  ? PAC:27460352
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006325 0.5kb upstream 0.5kb upstream 1429 true scaffold_2: 1705584-1707012 Theobroma cacao
Thecc1EG006325 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1705584-1706083 Theobroma cacao
Thecc1EG006325 0.5kb downstream 0.5kb downstream 1429 true scaffold_2: 1706084-1707512 Theobroma cacao
Thecc1EG006325 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1707013-1707512 Theobroma cacao
Thecc1EG006325 1.0kb upstream 1.0kb upstream 1929 true scaffold_2: 1705084-1707012 Theobroma cacao
Thecc1EG006325 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1705084-1706083 Theobroma cacao
Thecc1EG006325 1.0kb downstream 1.0kb downstream 1929 true scaffold_2: 1706084-1708012 Theobroma cacao
Thecc1EG006325 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1707013-1708012 Theobroma cacao
Thecc1EG006325 2.0kb upstream 2.0kb upstream 2929 true scaffold_2: 1704084-1707012 Theobroma cacao
Thecc1EG006325 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1704084-1706083 Theobroma cacao
Thecc1EG006325 2.0kb downstream 2.0kb downstream 2929 true scaffold_2: 1706084-1709012 Theobroma cacao
Thecc1EG006325 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1707013-1709012 Theobroma cacao
Thecc1EG006325 5.0kb upstream 5.0kb upstream 5929 true scaffold_2: 1701084-1707012 Theobroma cacao
Thecc1EG006325 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1701084-1706083 Theobroma cacao
Thecc1EG006325 5.0kb downstream 5.0kb downstream 5929 true scaffold_2: 1706084-1712012 Theobroma cacao
Thecc1EG006325 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1707013-1712012 Theobroma cacao
Thecc1EG006325 10.0kb upstream 10.0kb upstream 10929 true scaffold_2: 1696084-1707012 Theobroma cacao
Thecc1EG006325 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1696084-1706083 Theobroma cacao
Thecc1EG006325 10.0kb downstream 10.0kb downstream 10929 true scaffold_2: 1706084-1717012 Theobroma cacao
Thecc1EG006325 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1707013-1717012 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826640 5264 Brassicales-Malvales View MSA
124349305 5266 SBM View MSA
124248858 5268 Malvidae View MSA
124073225 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain