Gene : Thecc1EG006299 T. cacao v1.1
Defline:  (1 of 1) PTHR24096:SF134 - LONG CHAIN ACYL-COA SYNTHETASE 2 Genomic Order:  283
Name:  ? Thecc1EG006299 Secondary Identifier:  ? PAC:27461082
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY-321 Theobroma cacao pathologic  
Tcacao PWY-5136 Theobroma cacao pathologic  
Tcacao PWY-5143 Theobroma cacao pathologic  
Tcacao PWY-5147 Theobroma cacao pathologic  
Tcacao PWY-5156 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5885 Theobroma cacao pathologic  
Tcacao PWY-5971 Theobroma cacao pathologic  
Tcacao PWY-5989 Theobroma cacao pathologic  
Tcacao PWY66-389 Theobroma cacao pathologic  
Tcacao PWY-6733 Theobroma cacao pathologic  
Tcacao PWY-6803 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006299 0.5kb upstream 0.5kb upstream 5728 true scaffold_2: 1625604-1631331 Theobroma cacao
Thecc1EG006299 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1630832-1631331 Theobroma cacao
Thecc1EG006299 0.5kb downstream 0.5kb downstream 5728 true scaffold_2: 1625104-1630831 Theobroma cacao
Thecc1EG006299 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1625104-1625603 Theobroma cacao
Thecc1EG006299 1.0kb upstream 1.0kb upstream 6228 true scaffold_2: 1625604-1631831 Theobroma cacao
Thecc1EG006299 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1630832-1631831 Theobroma cacao
Thecc1EG006299 1.0kb downstream 1.0kb downstream 6228 true scaffold_2: 1624604-1630831 Theobroma cacao
Thecc1EG006299 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1624604-1625603 Theobroma cacao
Thecc1EG006299 2.0kb upstream 2.0kb upstream 7228 true scaffold_2: 1625604-1632831 Theobroma cacao
Thecc1EG006299 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1630832-1632831 Theobroma cacao
Thecc1EG006299 2.0kb downstream 2.0kb downstream 7228 true scaffold_2: 1623604-1630831 Theobroma cacao
Thecc1EG006299 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1623604-1625603 Theobroma cacao
Thecc1EG006299 5.0kb upstream 5.0kb upstream 10228 true scaffold_2: 1625604-1635831 Theobroma cacao
Thecc1EG006299 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1630832-1635831 Theobroma cacao
Thecc1EG006299 5.0kb downstream 5.0kb downstream 10228 true scaffold_2: 1620604-1630831 Theobroma cacao
Thecc1EG006299 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1620604-1625603 Theobroma cacao
Thecc1EG006299 10.0kb upstream 10.0kb upstream 15228 true scaffold_2: 1625604-1640831 Theobroma cacao
Thecc1EG006299 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1630832-1640831 Theobroma cacao
Thecc1EG006299 10.0kb downstream 10.0kb downstream 15228 true scaffold_2: 1615604-1630831 Theobroma cacao
Thecc1EG006299 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1615604-1625603 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830194 5264 Brassicales-Malvales View MSA
124339284 5266 SBM View MSA
124245132 5268 Malvidae View MSA
124069008 5270 Rosid View MSA
123751064 5271 Pentapetalae View MSA
122791747 5272 Eudicot View MSA
122047711 5273 Angiosperm View MSA
121350386 5274 Embryophyte View MSA
123426542 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain