Gene : Thecc1EG006308 T. cacao v1.1
Defline:  (1 of 1) PTHR13871//PTHR13871:SF51 - THIOREDOXIN // CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN Genomic Order:  289
Name:  ? Thecc1EG006308 Secondary Identifier:  ? PAC:27464113
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006308 0.5kb upstream 0.5kb upstream 3821 true scaffold_2: 1645199-1649019 Theobroma cacao
Thecc1EG006308 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1645199-1645698 Theobroma cacao
Thecc1EG006308 0.5kb downstream 0.5kb downstream 3821 true scaffold_2: 1645699-1649519 Theobroma cacao
Thecc1EG006308 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1649020-1649519 Theobroma cacao
Thecc1EG006308 1.0kb upstream 1.0kb upstream 4321 true scaffold_2: 1644699-1649019 Theobroma cacao
Thecc1EG006308 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1644699-1645698 Theobroma cacao
Thecc1EG006308 1.0kb downstream 1.0kb downstream 4321 true scaffold_2: 1645699-1650019 Theobroma cacao
Thecc1EG006308 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1649020-1650019 Theobroma cacao
Thecc1EG006308 2.0kb upstream 2.0kb upstream 5321 true scaffold_2: 1643699-1649019 Theobroma cacao
Thecc1EG006308 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1643699-1645698 Theobroma cacao
Thecc1EG006308 2.0kb downstream 2.0kb downstream 5321 true scaffold_2: 1645699-1651019 Theobroma cacao
Thecc1EG006308 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1649020-1651019 Theobroma cacao
Thecc1EG006308 5.0kb upstream 5.0kb upstream 8321 true scaffold_2: 1640699-1649019 Theobroma cacao
Thecc1EG006308 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1640699-1645698 Theobroma cacao
Thecc1EG006308 5.0kb downstream 5.0kb downstream 8321 true scaffold_2: 1645699-1654019 Theobroma cacao
Thecc1EG006308 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1649020-1654019 Theobroma cacao
Thecc1EG006308 10.0kb upstream 10.0kb upstream 13321 true scaffold_2: 1635699-1649019 Theobroma cacao
Thecc1EG006308 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1635699-1645698 Theobroma cacao
Thecc1EG006308 10.0kb downstream 10.0kb downstream 13321 true scaffold_2: 1645699-1659019 Theobroma cacao
Thecc1EG006308 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1649020-1659019 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123817714 5264 Brassicales-Malvales Singleton cluster - no MSA
124314056 5266 SBM Singleton cluster - no MSA
124163090 5268 Malvidae Singleton cluster - no MSA
124074302 5270 Rosid View MSA
123750493 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain