Gene : Thecc1EG006288 T. cacao v1.1
Defline:  (1 of 1) K08873 - PI-3-kinase-related kinase SMG-1 (SMG1) Genomic Order:  274
Name:  ? Thecc1EG006288 Secondary Identifier:  ? PAC:27460161
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006288 0.5kb upstream 0.5kb upstream 18442 true scaffold_2: 1569057-1587498 Theobroma cacao
Thecc1EG006288 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1569057-1569556 Theobroma cacao
Thecc1EG006288 0.5kb downstream 0.5kb downstream 18442 true scaffold_2: 1569557-1587998 Theobroma cacao
Thecc1EG006288 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1587499-1587998 Theobroma cacao
Thecc1EG006288 1.0kb upstream 1.0kb upstream 18942 true scaffold_2: 1568557-1587498 Theobroma cacao
Thecc1EG006288 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1568557-1569556 Theobroma cacao
Thecc1EG006288 1.0kb downstream 1.0kb downstream 18942 true scaffold_2: 1569557-1588498 Theobroma cacao
Thecc1EG006288 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1587499-1588498 Theobroma cacao
Thecc1EG006288 2.0kb upstream 2.0kb upstream 19942 true scaffold_2: 1567557-1587498 Theobroma cacao
Thecc1EG006288 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1567557-1569556 Theobroma cacao
Thecc1EG006288 2.0kb downstream 2.0kb downstream 19942 true scaffold_2: 1569557-1589498 Theobroma cacao
Thecc1EG006288 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1587499-1589498 Theobroma cacao
Thecc1EG006288 5.0kb upstream 5.0kb upstream 22942 true scaffold_2: 1564557-1587498 Theobroma cacao
Thecc1EG006288 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1564557-1569556 Theobroma cacao
Thecc1EG006288 5.0kb downstream 5.0kb downstream 22942 true scaffold_2: 1569557-1592498 Theobroma cacao
Thecc1EG006288 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1587499-1592498 Theobroma cacao
Thecc1EG006288 10.0kb upstream 10.0kb upstream 27942 true scaffold_2: 1559557-1587498 Theobroma cacao
Thecc1EG006288 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1559557-1569556 Theobroma cacao
Thecc1EG006288 10.0kb downstream 10.0kb downstream 27942 true scaffold_2: 1569557-1597498 Theobroma cacao
Thecc1EG006288 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1587499-1597498 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829471 5264 Brassicales-Malvales View MSA
124338969 5266 SBM View MSA
124237422 5268 Malvidae View MSA
124050345 5270 Rosid View MSA
123740194 5271 Pentapetalae View MSA
122789167 5272 Eudicot View MSA
122046807 5273 Angiosperm View MSA
121348670 5274 Embryophyte View MSA
123425696 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain