Gene : Thecc1EG006293 T. cacao v1.1

Defline:  (1 of 2) PTHR10218:SF222 - EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 1 Genomic Order:  278
Name:  ? Thecc1EG006293 Secondary Identifier:  ? PAC:27464940

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006293 0.5kb upstream 0.5kb upstream 6847 true scaffold_2: 1591537-1598383 Theobroma cacao
Thecc1EG006293 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1597884-1598383 Theobroma cacao
Thecc1EG006293 0.5kb downstream 0.5kb downstream 6847 true scaffold_2: 1591037-1597883 Theobroma cacao
Thecc1EG006293 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1591037-1591536 Theobroma cacao
Thecc1EG006293 1.0kb upstream 1.0kb upstream 7347 true scaffold_2: 1591537-1598883 Theobroma cacao
Thecc1EG006293 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1597884-1598883 Theobroma cacao
Thecc1EG006293 1.0kb downstream 1.0kb downstream 7347 true scaffold_2: 1590537-1597883 Theobroma cacao
Thecc1EG006293 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1590537-1591536 Theobroma cacao
Thecc1EG006293 2.0kb upstream 2.0kb upstream 8347 true scaffold_2: 1591537-1599883 Theobroma cacao
Thecc1EG006293 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1597884-1599883 Theobroma cacao
Thecc1EG006293 2.0kb downstream 2.0kb downstream 8347 true scaffold_2: 1589537-1597883 Theobroma cacao
Thecc1EG006293 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1589537-1591536 Theobroma cacao
Thecc1EG006293 5.0kb upstream 5.0kb upstream 11347 true scaffold_2: 1591537-1602883 Theobroma cacao
Thecc1EG006293 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1597884-1602883 Theobroma cacao
Thecc1EG006293 5.0kb downstream 5.0kb downstream 11347 true scaffold_2: 1586537-1597883 Theobroma cacao
Thecc1EG006293 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1586537-1591536 Theobroma cacao
Thecc1EG006293 10.0kb upstream 10.0kb upstream 16347 true scaffold_2: 1591537-1607883 Theobroma cacao
Thecc1EG006293 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1597884-1607883 Theobroma cacao
Thecc1EG006293 10.0kb downstream 10.0kb downstream 16347 true scaffold_2: 1581537-1597883 Theobroma cacao
Thecc1EG006293 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1581537-1591536 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825074 5264 Brassicales-Malvales View MSA
124349869 5266 SBM View MSA
124246708 5268 Malvidae View MSA
124071824 5270 Rosid View MSA
123748339 5271 Pentapetalae View MSA
122798673 5272 Eudicot View MSA
122051090 5273 Angiosperm View MSA
121350820 5274 Embryophyte View MSA
123381896 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain