Gene : Thecc1EG006248 T. cacao v1.1
Defline:  (1 of 1) K10134 - etoposide-induced 2.4 mRNA (EI24) Genomic Order:  244
Name:  ? Thecc1EG006248 Secondary Identifier:  ? PAC:27464013
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006248 0.5kb upstream 0.5kb upstream 6857 true scaffold_2: 1389459-1396315 Theobroma cacao
Thecc1EG006248 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1389459-1389958 Theobroma cacao
Thecc1EG006248 0.5kb downstream 0.5kb downstream 6857 true scaffold_2: 1389959-1396815 Theobroma cacao
Thecc1EG006248 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1396316-1396815 Theobroma cacao
Thecc1EG006248 1.0kb upstream 1.0kb upstream 7357 true scaffold_2: 1388959-1396315 Theobroma cacao
Thecc1EG006248 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1388959-1389958 Theobroma cacao
Thecc1EG006248 1.0kb downstream 1.0kb downstream 7357 true scaffold_2: 1389959-1397315 Theobroma cacao
Thecc1EG006248 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1396316-1397315 Theobroma cacao
Thecc1EG006248 2.0kb upstream 2.0kb upstream 8357 true scaffold_2: 1387959-1396315 Theobroma cacao
Thecc1EG006248 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1387959-1389958 Theobroma cacao
Thecc1EG006248 2.0kb downstream 2.0kb downstream 8357 true scaffold_2: 1389959-1398315 Theobroma cacao
Thecc1EG006248 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1396316-1398315 Theobroma cacao
Thecc1EG006248 5.0kb upstream 5.0kb upstream 11357 true scaffold_2: 1384959-1396315 Theobroma cacao
Thecc1EG006248 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1384959-1389958 Theobroma cacao
Thecc1EG006248 5.0kb downstream 5.0kb downstream 11357 true scaffold_2: 1389959-1401315 Theobroma cacao
Thecc1EG006248 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1396316-1401315 Theobroma cacao
Thecc1EG006248 10.0kb upstream 10.0kb upstream 16357 true scaffold_2: 1379959-1396315 Theobroma cacao
Thecc1EG006248 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1379959-1389958 Theobroma cacao
Thecc1EG006248 10.0kb downstream 10.0kb downstream 16357 true scaffold_2: 1389959-1406315 Theobroma cacao
Thecc1EG006248 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1396316-1406315 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829704 5264 Brassicales-Malvales View MSA
124337393 5266 SBM View MSA
124238213 5268 Malvidae View MSA
124060748 5270 Rosid View MSA
123747133 5271 Pentapetalae View MSA
122786672 5272 Eudicot View MSA
122041577 5273 Angiosperm View MSA
121347072 5274 Embryophyte View MSA
123425486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain