Gene : Thecc1EG006436 T. cacao v1.1

Defline:  (1 of 60) PF00892 - EamA-like transporter family (EamA) Genomic Order:  409
Name:  ? Thecc1EG006436 Secondary Identifier:  ? PAC:27460009

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006436 0.5kb upstream 0.5kb upstream 11077 true scaffold_2: 2221955-2233031 Theobroma cacao
Thecc1EG006436 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2232532-2233031 Theobroma cacao
Thecc1EG006436 0.5kb downstream 0.5kb downstream 11077 true scaffold_2: 2221455-2232531 Theobroma cacao
Thecc1EG006436 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2221455-2221954 Theobroma cacao
Thecc1EG006436 1.0kb upstream 1.0kb upstream 11577 true scaffold_2: 2221955-2233531 Theobroma cacao
Thecc1EG006436 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2232532-2233531 Theobroma cacao
Thecc1EG006436 1.0kb downstream 1.0kb downstream 11577 true scaffold_2: 2220955-2232531 Theobroma cacao
Thecc1EG006436 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2220955-2221954 Theobroma cacao
Thecc1EG006436 2.0kb upstream 2.0kb upstream 12577 true scaffold_2: 2221955-2234531 Theobroma cacao
Thecc1EG006436 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2232532-2234531 Theobroma cacao
Thecc1EG006436 2.0kb downstream 2.0kb downstream 12577 true scaffold_2: 2219955-2232531 Theobroma cacao
Thecc1EG006436 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2219955-2221954 Theobroma cacao
Thecc1EG006436 5.0kb upstream 5.0kb upstream 15577 true scaffold_2: 2221955-2237531 Theobroma cacao
Thecc1EG006436 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2232532-2237531 Theobroma cacao
Thecc1EG006436 5.0kb downstream 5.0kb downstream 15577 true scaffold_2: 2216955-2232531 Theobroma cacao
Thecc1EG006436 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2216955-2221954 Theobroma cacao
Thecc1EG006436 10.0kb upstream 10.0kb upstream 20577 true scaffold_2: 2221955-2242531 Theobroma cacao
Thecc1EG006436 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2232532-2242531 Theobroma cacao
Thecc1EG006436 10.0kb downstream 10.0kb downstream 20577 true scaffold_2: 2211955-2232531 Theobroma cacao
Thecc1EG006436 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2211955-2221954 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839979 5264 Brassicales-Malvales View MSA
124349557 5266 SBM View MSA
124251813 5268 Malvidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain