Gene : Thecc1EG006429 T. cacao v1.1
Defline:  (1 of 3) PTHR13516//PTHR13516:SF9 - RIBONUCLEASE P SUBUNIT P25 // SUBFAMILY NOT NAMED Genomic Order:  403
Name:  ? Thecc1EG006429 Secondary Identifier:  ? PAC:27459612
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006429 0.5kb upstream 0.5kb upstream 3741 true scaffold_2: 2197606-2201346 Theobroma cacao
Thecc1EG006429 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2200847-2201346 Theobroma cacao
Thecc1EG006429 0.5kb downstream 0.5kb downstream 3741 true scaffold_2: 2197106-2200846 Theobroma cacao
Thecc1EG006429 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2197106-2197605 Theobroma cacao
Thecc1EG006429 1.0kb upstream 1.0kb upstream 4241 true scaffold_2: 2197606-2201846 Theobroma cacao
Thecc1EG006429 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2200847-2201846 Theobroma cacao
Thecc1EG006429 1.0kb downstream 1.0kb downstream 4241 true scaffold_2: 2196606-2200846 Theobroma cacao
Thecc1EG006429 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2196606-2197605 Theobroma cacao
Thecc1EG006429 2.0kb upstream 2.0kb upstream 5241 true scaffold_2: 2197606-2202846 Theobroma cacao
Thecc1EG006429 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2200847-2202846 Theobroma cacao
Thecc1EG006429 2.0kb downstream 2.0kb downstream 5241 true scaffold_2: 2195606-2200846 Theobroma cacao
Thecc1EG006429 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2195606-2197605 Theobroma cacao
Thecc1EG006429 5.0kb upstream 5.0kb upstream 8241 true scaffold_2: 2197606-2205846 Theobroma cacao
Thecc1EG006429 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2200847-2205846 Theobroma cacao
Thecc1EG006429 5.0kb downstream 5.0kb downstream 8241 true scaffold_2: 2192606-2200846 Theobroma cacao
Thecc1EG006429 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2192606-2197605 Theobroma cacao
Thecc1EG006429 10.0kb upstream 10.0kb upstream 13241 true scaffold_2: 2197606-2210846 Theobroma cacao
Thecc1EG006429 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2200847-2210846 Theobroma cacao
Thecc1EG006429 10.0kb downstream 10.0kb downstream 13241 true scaffold_2: 2187606-2200846 Theobroma cacao
Thecc1EG006429 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2187606-2197605 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823965 5264 Brassicales-Malvales View MSA
124320003 5266 SBM View MSA
124248843 5268 Malvidae View MSA
124072183 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain