Gene : Thecc1EG006425 T. cacao v1.1

Defline:  Uncharacterized protein (53%P) Genomic Order:  399
Name:  ? Thecc1EG006425 Secondary Identifier:  ? PAC:27460573

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006425 0.5kb upstream 0.5kb upstream 5667 true scaffold_2: 2164248-2169914 Theobroma cacao
Thecc1EG006425 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2164248-2164747 Theobroma cacao
Thecc1EG006425 0.5kb downstream 0.5kb downstream 5667 true scaffold_2: 2164748-2170414 Theobroma cacao
Thecc1EG006425 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2169915-2170414 Theobroma cacao
Thecc1EG006425 1.0kb upstream 1.0kb upstream 6167 true scaffold_2: 2163748-2169914 Theobroma cacao
Thecc1EG006425 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2163748-2164747 Theobroma cacao
Thecc1EG006425 1.0kb downstream 1.0kb downstream 6167 true scaffold_2: 2164748-2170914 Theobroma cacao
Thecc1EG006425 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2169915-2170914 Theobroma cacao
Thecc1EG006425 2.0kb upstream 2.0kb upstream 7167 true scaffold_2: 2162748-2169914 Theobroma cacao
Thecc1EG006425 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2162748-2164747 Theobroma cacao
Thecc1EG006425 2.0kb downstream 2.0kb downstream 7167 true scaffold_2: 2164748-2171914 Theobroma cacao
Thecc1EG006425 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2169915-2171914 Theobroma cacao
Thecc1EG006425 5.0kb upstream 5.0kb upstream 10167 true scaffold_2: 2159748-2169914 Theobroma cacao
Thecc1EG006425 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2159748-2164747 Theobroma cacao
Thecc1EG006425 5.0kb downstream 5.0kb downstream 10167 true scaffold_2: 2164748-2174914 Theobroma cacao
Thecc1EG006425 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2169915-2174914 Theobroma cacao
Thecc1EG006425 10.0kb upstream 10.0kb upstream 15167 true scaffold_2: 2154748-2169914 Theobroma cacao
Thecc1EG006425 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2154748-2164747 Theobroma cacao
Thecc1EG006425 10.0kb downstream 10.0kb downstream 15167 true scaffold_2: 2164748-2179914 Theobroma cacao
Thecc1EG006425 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2169915-2179914 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825996 5264 Brassicales-Malvales View MSA
124320850 5266 SBM View MSA
124249016 5268 Malvidae View MSA
124072404 5270 Rosid View MSA
123746861 5271 Pentapetalae View MSA
122787160 5272 Eudicot View MSA
122049773 5273 Angiosperm View MSA
121345275 5274 Embryophyte View MSA
123425777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain