Gene : Thecc1EG006417 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  391
Name:  ? Thecc1EG006417 Secondary Identifier:  ? PAC:27460004
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006417 0.5kb upstream 0.5kb upstream 2677 true scaffold_2: 2119025-2121701 Theobroma cacao
Thecc1EG006417 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2121202-2121701 Theobroma cacao
Thecc1EG006417 0.5kb downstream 0.5kb downstream 2677 true scaffold_2: 2118525-2121201 Theobroma cacao
Thecc1EG006417 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2118525-2119024 Theobroma cacao
Thecc1EG006417 1.0kb upstream 1.0kb upstream 3177 true scaffold_2: 2119025-2122201 Theobroma cacao
Thecc1EG006417 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2121202-2122201 Theobroma cacao
Thecc1EG006417 1.0kb downstream 1.0kb downstream 3177 true scaffold_2: 2118025-2121201 Theobroma cacao
Thecc1EG006417 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2118025-2119024 Theobroma cacao
Thecc1EG006417 2.0kb upstream 2.0kb upstream 4177 true scaffold_2: 2119025-2123201 Theobroma cacao
Thecc1EG006417 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2121202-2123201 Theobroma cacao
Thecc1EG006417 2.0kb downstream 2.0kb downstream 4177 true scaffold_2: 2117025-2121201 Theobroma cacao
Thecc1EG006417 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2117025-2119024 Theobroma cacao
Thecc1EG006417 5.0kb upstream 5.0kb upstream 7177 true scaffold_2: 2119025-2126201 Theobroma cacao
Thecc1EG006417 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2121202-2126201 Theobroma cacao
Thecc1EG006417 5.0kb downstream 5.0kb downstream 7177 true scaffold_2: 2114025-2121201 Theobroma cacao
Thecc1EG006417 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2114025-2119024 Theobroma cacao
Thecc1EG006417 10.0kb upstream 10.0kb upstream 12177 true scaffold_2: 2119025-2131201 Theobroma cacao
Thecc1EG006417 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2121202-2131201 Theobroma cacao
Thecc1EG006417 10.0kb downstream 10.0kb downstream 12177 true scaffold_2: 2109025-2121201 Theobroma cacao
Thecc1EG006417 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2109025-2119024 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827733 5264 Brassicales-Malvales View MSA
124336556 5266 SBM View MSA
124240267 5268 Malvidae View MSA
124065853 5270 Rosid View MSA
123740694 5271 Pentapetalae View MSA
122786557 5272 Eudicot View MSA
122042535 5273 Angiosperm View MSA
121309984 5274 Embryophyte View MSA
123347596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain