Gene : Thecc1EG006402 T. cacao v1.1
Defline:  (1 of 2) 2.3.1.199//6.2.1.2 - Very-long-chain 3-oxoacyl-CoA synthase / Very-long-chain beta-ketoacyl-CoA synthase // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  377
Name:  ? Thecc1EG006402 Secondary Identifier:  ? PAC:27462335
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Sequence Feature Displayer

Ontology Annotation Displayer

18 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY-321 Theobroma cacao pathologic  
Tcacao PWY-5080 Theobroma cacao pathologic  
Tcacao PWY-5136 Theobroma cacao pathologic  
Tcacao PWY-5143 Theobroma cacao pathologic  
Tcacao PWY-5147 Theobroma cacao pathologic  
Tcacao PWY-5156 Theobroma cacao pathologic  
Tcacao PWY-561 Theobroma cacao pathologic  
Tcacao PWY-5885 Theobroma cacao pathologic  
Tcacao PWY-5971 Theobroma cacao pathologic  
Tcacao PWY-5989 Theobroma cacao pathologic  
Tcacao PWY-6433 Theobroma cacao pathologic  
Tcacao PWY-6598 Theobroma cacao pathologic  
Tcacao PWY-6733 Theobroma cacao pathologic  
Tcacao PWY-6803 Theobroma cacao pathologic  
Tcacao PWY-7036 Theobroma cacao pathologic  
Tcacao PWY-7601 Theobroma cacao pathologic  
Tcacao PWY-7619 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006402 0.5kb upstream 0.5kb upstream 1853 true scaffold_2: 2058526-2060378 Theobroma cacao
Thecc1EG006402 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2058526-2059025 Theobroma cacao
Thecc1EG006402 0.5kb downstream 0.5kb downstream 1853 true scaffold_2: 2059026-2060878 Theobroma cacao
Thecc1EG006402 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2060379-2060878 Theobroma cacao
Thecc1EG006402 1.0kb upstream 1.0kb upstream 2353 true scaffold_2: 2058026-2060378 Theobroma cacao
Thecc1EG006402 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2058026-2059025 Theobroma cacao
Thecc1EG006402 1.0kb downstream 1.0kb downstream 2353 true scaffold_2: 2059026-2061378 Theobroma cacao
Thecc1EG006402 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2060379-2061378 Theobroma cacao
Thecc1EG006402 2.0kb upstream 2.0kb upstream 3353 true scaffold_2: 2057026-2060378 Theobroma cacao
Thecc1EG006402 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2057026-2059025 Theobroma cacao
Thecc1EG006402 2.0kb downstream 2.0kb downstream 3353 true scaffold_2: 2059026-2062378 Theobroma cacao
Thecc1EG006402 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2060379-2062378 Theobroma cacao
Thecc1EG006402 5.0kb upstream 5.0kb upstream 6353 true scaffold_2: 2054026-2060378 Theobroma cacao
Thecc1EG006402 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2054026-2059025 Theobroma cacao
Thecc1EG006402 5.0kb downstream 5.0kb downstream 6353 true scaffold_2: 2059026-2065378 Theobroma cacao
Thecc1EG006402 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2060379-2065378 Theobroma cacao
Thecc1EG006402 10.0kb upstream 10.0kb upstream 11353 true scaffold_2: 2049026-2060378 Theobroma cacao
Thecc1EG006402 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2049026-2059025 Theobroma cacao
Thecc1EG006402 10.0kb downstream 10.0kb downstream 11353 true scaffold_2: 2059026-2070378 Theobroma cacao
Thecc1EG006402 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2060379-2070378 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825318 5264 Brassicales-Malvales View MSA
124320551 5266 SBM View MSA
124248997 5268 Malvidae View MSA
124069111 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain