Gene : Thecc1EG006394 T. cacao v1.1
Defline:  (1 of 4) PTHR22884:SF370 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH5-RELATED Genomic Order:  370
Name:  ? Thecc1EG006394 Secondary Identifier:  ? PAC:27460605
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006394 0.5kb upstream 0.5kb upstream 3442 true scaffold_2: 2026569-2030010 Theobroma cacao
Thecc1EG006394 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2026569-2027068 Theobroma cacao
Thecc1EG006394 0.5kb downstream 0.5kb downstream 3442 true scaffold_2: 2027069-2030510 Theobroma cacao
Thecc1EG006394 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2030011-2030510 Theobroma cacao
Thecc1EG006394 1.0kb upstream 1.0kb upstream 3942 true scaffold_2: 2026069-2030010 Theobroma cacao
Thecc1EG006394 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2026069-2027068 Theobroma cacao
Thecc1EG006394 1.0kb downstream 1.0kb downstream 3942 true scaffold_2: 2027069-2031010 Theobroma cacao
Thecc1EG006394 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2030011-2031010 Theobroma cacao
Thecc1EG006394 2.0kb upstream 2.0kb upstream 4942 true scaffold_2: 2025069-2030010 Theobroma cacao
Thecc1EG006394 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2025069-2027068 Theobroma cacao
Thecc1EG006394 2.0kb downstream 2.0kb downstream 4942 true scaffold_2: 2027069-2032010 Theobroma cacao
Thecc1EG006394 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2030011-2032010 Theobroma cacao
Thecc1EG006394 5.0kb upstream 5.0kb upstream 7942 true scaffold_2: 2022069-2030010 Theobroma cacao
Thecc1EG006394 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2022069-2027068 Theobroma cacao
Thecc1EG006394 5.0kb downstream 5.0kb downstream 7942 true scaffold_2: 2027069-2035010 Theobroma cacao
Thecc1EG006394 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2030011-2035010 Theobroma cacao
Thecc1EG006394 10.0kb upstream 10.0kb upstream 12942 true scaffold_2: 2017069-2030010 Theobroma cacao
Thecc1EG006394 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2017069-2027068 Theobroma cacao
Thecc1EG006394 10.0kb downstream 10.0kb downstream 12942 true scaffold_2: 2027069-2040010 Theobroma cacao
Thecc1EG006394 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2030011-2040010 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839787 5264 Brassicales-Malvales View MSA
124349936 5266 SBM View MSA
124252064 5268 Malvidae View MSA
124069475 5270 Rosid View MSA
123753446 5271 Pentapetalae View MSA
122796724 5272 Eudicot View MSA
122050762 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350126 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain