Gene : Thecc1EG006650 T. cacao v1.1
Defline:  (1 of 2) PTHR12385//PTHR12385:SF44 - CTL TRANSPORTER // PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN Genomic Order:  599
Name:  ? Thecc1EG006650 Secondary Identifier:  ? PAC:27464643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006650 0.5kb upstream 0.5kb upstream 3861 true scaffold_2: 3143156-3147016 Theobroma cacao
Thecc1EG006650 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3146517-3147016 Theobroma cacao
Thecc1EG006650 0.5kb downstream 0.5kb downstream 3861 true scaffold_2: 3142656-3146516 Theobroma cacao
Thecc1EG006650 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3142656-3143155 Theobroma cacao
Thecc1EG006650 1.0kb upstream 1.0kb upstream 4361 true scaffold_2: 3143156-3147516 Theobroma cacao
Thecc1EG006650 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3146517-3147516 Theobroma cacao
Thecc1EG006650 1.0kb downstream 1.0kb downstream 4361 true scaffold_2: 3142156-3146516 Theobroma cacao
Thecc1EG006650 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3142156-3143155 Theobroma cacao
Thecc1EG006650 2.0kb upstream 2.0kb upstream 5361 true scaffold_2: 3143156-3148516 Theobroma cacao
Thecc1EG006650 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3146517-3148516 Theobroma cacao
Thecc1EG006650 2.0kb downstream 2.0kb downstream 5361 true scaffold_2: 3141156-3146516 Theobroma cacao
Thecc1EG006650 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3141156-3143155 Theobroma cacao
Thecc1EG006650 5.0kb upstream 5.0kb upstream 8361 true scaffold_2: 3143156-3151516 Theobroma cacao
Thecc1EG006650 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3146517-3151516 Theobroma cacao
Thecc1EG006650 5.0kb downstream 5.0kb downstream 8361 true scaffold_2: 3138156-3146516 Theobroma cacao
Thecc1EG006650 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3138156-3143155 Theobroma cacao
Thecc1EG006650 10.0kb upstream 10.0kb upstream 13361 true scaffold_2: 3143156-3156516 Theobroma cacao
Thecc1EG006650 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3146517-3156516 Theobroma cacao
Thecc1EG006650 10.0kb downstream 10.0kb downstream 13361 true scaffold_2: 3133156-3146516 Theobroma cacao
Thecc1EG006650 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3133156-3143155 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833858 5264 Brassicales-Malvales View MSA
124345026 5266 SBM View MSA
124236844 5268 Malvidae View MSA
124063847 5270 Rosid View MSA
123737171 5271 Pentapetalae View MSA
122792256 5272 Eudicot View MSA
122043593 5273 Angiosperm View MSA
121347298 5274 Embryophyte View MSA
123428325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain