Gene : Thecc1EG006604 T. cacao v1.1
Defline:  (1 of 1) K12868 - pre-mRNA-splicing factor SYF2 (SYF2) Genomic Order:  559
Name:  ? Thecc1EG006604 Secondary Identifier:  ? PAC:27463495
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006604 0.5kb upstream 0.5kb upstream 3082 true scaffold_2: 2919067-2922148 Theobroma cacao
Thecc1EG006604 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2919067-2919566 Theobroma cacao
Thecc1EG006604 0.5kb downstream 0.5kb downstream 3082 true scaffold_2: 2919567-2922648 Theobroma cacao
Thecc1EG006604 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2922149-2922648 Theobroma cacao
Thecc1EG006604 1.0kb upstream 1.0kb upstream 3582 true scaffold_2: 2918567-2922148 Theobroma cacao
Thecc1EG006604 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2918567-2919566 Theobroma cacao
Thecc1EG006604 1.0kb downstream 1.0kb downstream 3582 true scaffold_2: 2919567-2923148 Theobroma cacao
Thecc1EG006604 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2922149-2923148 Theobroma cacao
Thecc1EG006604 2.0kb upstream 2.0kb upstream 4582 true scaffold_2: 2917567-2922148 Theobroma cacao
Thecc1EG006604 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2917567-2919566 Theobroma cacao
Thecc1EG006604 2.0kb downstream 2.0kb downstream 4582 true scaffold_2: 2919567-2924148 Theobroma cacao
Thecc1EG006604 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2922149-2924148 Theobroma cacao
Thecc1EG006604 5.0kb upstream 5.0kb upstream 7582 true scaffold_2: 2914567-2922148 Theobroma cacao
Thecc1EG006604 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2914567-2919566 Theobroma cacao
Thecc1EG006604 5.0kb downstream 5.0kb downstream 7582 true scaffold_2: 2919567-2927148 Theobroma cacao
Thecc1EG006604 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2922149-2927148 Theobroma cacao
Thecc1EG006604 10.0kb upstream 10.0kb upstream 12582 true scaffold_2: 2909567-2922148 Theobroma cacao
Thecc1EG006604 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2909567-2919566 Theobroma cacao
Thecc1EG006604 10.0kb downstream 10.0kb downstream 12582 true scaffold_2: 2919567-2932148 Theobroma cacao
Thecc1EG006604 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2922149-2932148 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828655 5264 Brassicales-Malvales View MSA
124345716 5266 SBM View MSA
124253605 5268 Malvidae View MSA
124068841 5270 Rosid View MSA
123740835 5271 Pentapetalae View MSA
122793890 5272 Eudicot View MSA
122049804 5273 Angiosperm View MSA
121347073 5274 Embryophyte View MSA
123424870 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain