Gene : Thecc1EG006546 T. cacao v1.1
Defline:  (1 of 2) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED Genomic Order:  509
Name:  ? Thecc1EG006546 Secondary Identifier:  ? PAC:27460205
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006546 0.5kb upstream 0.5kb upstream 1495 true scaffold_2: 2668828-2670322 Theobroma cacao
Thecc1EG006546 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2668828-2669327 Theobroma cacao
Thecc1EG006546 0.5kb downstream 0.5kb downstream 1495 true scaffold_2: 2669328-2670822 Theobroma cacao
Thecc1EG006546 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2670323-2670822 Theobroma cacao
Thecc1EG006546 1.0kb upstream 1.0kb upstream 1995 true scaffold_2: 2668328-2670322 Theobroma cacao
Thecc1EG006546 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2668328-2669327 Theobroma cacao
Thecc1EG006546 1.0kb downstream 1.0kb downstream 1995 true scaffold_2: 2669328-2671322 Theobroma cacao
Thecc1EG006546 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2670323-2671322 Theobroma cacao
Thecc1EG006546 2.0kb upstream 2.0kb upstream 2995 true scaffold_2: 2667328-2670322 Theobroma cacao
Thecc1EG006546 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2667328-2669327 Theobroma cacao
Thecc1EG006546 2.0kb downstream 2.0kb downstream 2995 true scaffold_2: 2669328-2672322 Theobroma cacao
Thecc1EG006546 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2670323-2672322 Theobroma cacao
Thecc1EG006546 5.0kb upstream 5.0kb upstream 5995 true scaffold_2: 2664328-2670322 Theobroma cacao
Thecc1EG006546 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2664328-2669327 Theobroma cacao
Thecc1EG006546 5.0kb downstream 5.0kb downstream 5995 true scaffold_2: 2669328-2675322 Theobroma cacao
Thecc1EG006546 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2670323-2675322 Theobroma cacao
Thecc1EG006546 10.0kb upstream 10.0kb upstream 10995 true scaffold_2: 2659328-2670322 Theobroma cacao
Thecc1EG006546 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2659328-2669327 Theobroma cacao
Thecc1EG006546 10.0kb downstream 10.0kb downstream 10995 true scaffold_2: 2669328-2680322 Theobroma cacao
Thecc1EG006546 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2670323-2680322 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816976 5264 Brassicales-Malvales Singleton cluster - no MSA
124313349 5266 SBM Singleton cluster - no MSA
124249129 5268 Malvidae View MSA
124051327 5270 Rosid View MSA
123752174 5271 Pentapetalae View MSA
122774401 5272 Eudicot View MSA
122050096 5273 Angiosperm View MSA
121311737 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain