Gene : Thecc1EG006548 T. cacao v1.1
Defline:  Pentatricopeptide (PPR) repeat-containing protein Genomic Order:  511
Name:  ? Thecc1EG006548 Secondary Identifier:  ? PAC:27463946
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006548 0.5kb upstream 0.5kb upstream 2570 true scaffold_2: 2685154-2687723 Theobroma cacao
Thecc1EG006548 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2687224-2687723 Theobroma cacao
Thecc1EG006548 0.5kb downstream 0.5kb downstream 2570 true scaffold_2: 2684654-2687223 Theobroma cacao
Thecc1EG006548 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2684654-2685153 Theobroma cacao
Thecc1EG006548 1.0kb upstream 1.0kb upstream 3070 true scaffold_2: 2685154-2688223 Theobroma cacao
Thecc1EG006548 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2687224-2688223 Theobroma cacao
Thecc1EG006548 1.0kb downstream 1.0kb downstream 3070 true scaffold_2: 2684154-2687223 Theobroma cacao
Thecc1EG006548 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2684154-2685153 Theobroma cacao
Thecc1EG006548 2.0kb upstream 2.0kb upstream 4070 true scaffold_2: 2685154-2689223 Theobroma cacao
Thecc1EG006548 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2687224-2689223 Theobroma cacao
Thecc1EG006548 2.0kb downstream 2.0kb downstream 4070 true scaffold_2: 2683154-2687223 Theobroma cacao
Thecc1EG006548 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2683154-2685153 Theobroma cacao
Thecc1EG006548 5.0kb upstream 5.0kb upstream 7070 true scaffold_2: 2685154-2692223 Theobroma cacao
Thecc1EG006548 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2687224-2692223 Theobroma cacao
Thecc1EG006548 5.0kb downstream 5.0kb downstream 7070 true scaffold_2: 2680154-2687223 Theobroma cacao
Thecc1EG006548 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2680154-2685153 Theobroma cacao
Thecc1EG006548 10.0kb upstream 10.0kb upstream 12070 true scaffold_2: 2685154-2697223 Theobroma cacao
Thecc1EG006548 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2687224-2697223 Theobroma cacao
Thecc1EG006548 10.0kb downstream 10.0kb downstream 12070 true scaffold_2: 2675154-2687223 Theobroma cacao
Thecc1EG006548 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2675154-2685153 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829746 5264 Brassicales-Malvales View MSA
124344114 5266 SBM View MSA
124240333 5268 Malvidae View MSA
124063898 5270 Rosid View MSA
123736801 5271 Pentapetalae View MSA
122790461 5272 Eudicot View MSA
122047687 5273 Angiosperm View MSA
121347538 5274 Embryophyte View MSA
123380566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain