Gene : Thecc1EG006547 T. cacao v1.1

Defline:  (1 of 1) K06640 - serine/threonine-protein kinase ATR (ATR) Genomic Order:  510
Name:  ? Thecc1EG006547 Secondary Identifier:  ? PAC:27464062

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006547 0.5kb upstream 0.5kb upstream 14385 true scaffold_2: 2670785-2685169 Theobroma cacao
Thecc1EG006547 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2670785-2671284 Theobroma cacao
Thecc1EG006547 0.5kb downstream 0.5kb downstream 14385 true scaffold_2: 2671285-2685669 Theobroma cacao
Thecc1EG006547 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2685170-2685669 Theobroma cacao
Thecc1EG006547 1.0kb upstream 1.0kb upstream 14885 true scaffold_2: 2670285-2685169 Theobroma cacao
Thecc1EG006547 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2670285-2671284 Theobroma cacao
Thecc1EG006547 1.0kb downstream 1.0kb downstream 14885 true scaffold_2: 2671285-2686169 Theobroma cacao
Thecc1EG006547 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2685170-2686169 Theobroma cacao
Thecc1EG006547 2.0kb upstream 2.0kb upstream 15885 true scaffold_2: 2669285-2685169 Theobroma cacao
Thecc1EG006547 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2669285-2671284 Theobroma cacao
Thecc1EG006547 2.0kb downstream 2.0kb downstream 15885 true scaffold_2: 2671285-2687169 Theobroma cacao
Thecc1EG006547 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2685170-2687169 Theobroma cacao
Thecc1EG006547 5.0kb upstream 5.0kb upstream 18885 true scaffold_2: 2666285-2685169 Theobroma cacao
Thecc1EG006547 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2666285-2671284 Theobroma cacao
Thecc1EG006547 5.0kb downstream 5.0kb downstream 18885 true scaffold_2: 2671285-2690169 Theobroma cacao
Thecc1EG006547 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2685170-2690169 Theobroma cacao
Thecc1EG006547 10.0kb upstream 10.0kb upstream 23885 true scaffold_2: 2661285-2685169 Theobroma cacao
Thecc1EG006547 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2661285-2671284 Theobroma cacao
Thecc1EG006547 10.0kb downstream 10.0kb downstream 23885 true scaffold_2: 2671285-2695169 Theobroma cacao
Thecc1EG006547 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2685170-2695169 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829590 5264 Brassicales-Malvales View MSA
124339305 5266 SBM View MSA
124241595 5268 Malvidae View MSA
124068792 5270 Rosid View MSA
123737663 5271 Pentapetalae View MSA
122786169 5272 Eudicot View MSA
122044590 5273 Angiosperm View MSA
121345058 5274 Embryophyte View MSA
123426906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain