Gene : Thecc1EG006530 T. cacao v1.1
Defline:  (1 of 2) PTHR22835//PTHR22835:SF268 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  496
Name:  ? Thecc1EG006530 Secondary Identifier:  ? PAC:27461445
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006530 0.5kb upstream 0.5kb upstream 2387 true scaffold_2: 2605176-2607562 Theobroma cacao
Thecc1EG006530 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2605176-2605675 Theobroma cacao
Thecc1EG006530 0.5kb downstream 0.5kb downstream 2387 true scaffold_2: 2605676-2608062 Theobroma cacao
Thecc1EG006530 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2607563-2608062 Theobroma cacao
Thecc1EG006530 1.0kb upstream 1.0kb upstream 2887 true scaffold_2: 2604676-2607562 Theobroma cacao
Thecc1EG006530 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2604676-2605675 Theobroma cacao
Thecc1EG006530 1.0kb downstream 1.0kb downstream 2887 true scaffold_2: 2605676-2608562 Theobroma cacao
Thecc1EG006530 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2607563-2608562 Theobroma cacao
Thecc1EG006530 2.0kb upstream 2.0kb upstream 3887 true scaffold_2: 2603676-2607562 Theobroma cacao
Thecc1EG006530 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2603676-2605675 Theobroma cacao
Thecc1EG006530 2.0kb downstream 2.0kb downstream 3887 true scaffold_2: 2605676-2609562 Theobroma cacao
Thecc1EG006530 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2607563-2609562 Theobroma cacao
Thecc1EG006530 5.0kb upstream 5.0kb upstream 6887 true scaffold_2: 2600676-2607562 Theobroma cacao
Thecc1EG006530 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2600676-2605675 Theobroma cacao
Thecc1EG006530 5.0kb downstream 5.0kb downstream 6887 true scaffold_2: 2605676-2612562 Theobroma cacao
Thecc1EG006530 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2607563-2612562 Theobroma cacao
Thecc1EG006530 10.0kb upstream 10.0kb upstream 11887 true scaffold_2: 2595676-2607562 Theobroma cacao
Thecc1EG006530 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2595676-2605675 Theobroma cacao
Thecc1EG006530 10.0kb downstream 10.0kb downstream 11887 true scaffold_2: 2605676-2617562 Theobroma cacao
Thecc1EG006530 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2607563-2617562 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824985 5264 Brassicales-Malvales View MSA
124350782 5266 SBM View MSA
124247051 5268 Malvidae View MSA
124074404 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain