Gene : Thecc1EG006766 T. cacao v1.1

Defline:  (1 of 2) PTHR13690//PTHR13690:SF76 - FAMILY NOT NAMED // BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  704
Name:  ? Thecc1EG006766 Secondary Identifier:  ? PAC:27461174

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006766 0.5kb upstream 0.5kb upstream 4451 true scaffold_2: 3635045-3639495 Theobroma cacao
Thecc1EG006766 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3638996-3639495 Theobroma cacao
Thecc1EG006766 0.5kb downstream 0.5kb downstream 4451 true scaffold_2: 3634545-3638995 Theobroma cacao
Thecc1EG006766 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3634545-3635044 Theobroma cacao
Thecc1EG006766 1.0kb upstream 1.0kb upstream 4951 true scaffold_2: 3635045-3639995 Theobroma cacao
Thecc1EG006766 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3638996-3639995 Theobroma cacao
Thecc1EG006766 1.0kb downstream 1.0kb downstream 4951 true scaffold_2: 3634045-3638995 Theobroma cacao
Thecc1EG006766 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3634045-3635044 Theobroma cacao
Thecc1EG006766 2.0kb upstream 2.0kb upstream 5951 true scaffold_2: 3635045-3640995 Theobroma cacao
Thecc1EG006766 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3638996-3640995 Theobroma cacao
Thecc1EG006766 2.0kb downstream 2.0kb downstream 5951 true scaffold_2: 3633045-3638995 Theobroma cacao
Thecc1EG006766 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3633045-3635044 Theobroma cacao
Thecc1EG006766 5.0kb upstream 5.0kb upstream 8951 true scaffold_2: 3635045-3643995 Theobroma cacao
Thecc1EG006766 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3638996-3643995 Theobroma cacao
Thecc1EG006766 5.0kb downstream 5.0kb downstream 8951 true scaffold_2: 3630045-3638995 Theobroma cacao
Thecc1EG006766 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3630045-3635044 Theobroma cacao
Thecc1EG006766 10.0kb upstream 10.0kb upstream 13951 true scaffold_2: 3635045-3648995 Theobroma cacao
Thecc1EG006766 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3638996-3648995 Theobroma cacao
Thecc1EG006766 10.0kb downstream 10.0kb downstream 13951 true scaffold_2: 3625045-3638995 Theobroma cacao
Thecc1EG006766 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3625045-3635044 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841497 5264 Brassicales-Malvales View MSA
124340276 5266 SBM View MSA
124244300 5268 Malvidae View MSA
124066313 5270 Rosid View MSA
123743567 5271 Pentapetalae View MSA
122796613 5272 Eudicot View MSA
122046489 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121310613 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain