Gene : Thecc1EG006767 T. cacao v1.1

Defline:  (1 of 1) PTHR31421//PTHR31421:SF3 - FAMILY NOT NAMED // PROTEIN BASIC PENTACYSTEINE4-RELATED Genomic Order:  705
Name:  ? Thecc1EG006767 Secondary Identifier:  ? PAC:27464718

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006767 0.5kb upstream 0.5kb upstream 4278 true scaffold_2: 3645290-3649567 Theobroma cacao
Thecc1EG006767 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3649068-3649567 Theobroma cacao
Thecc1EG006767 0.5kb downstream 0.5kb downstream 4278 true scaffold_2: 3644790-3649067 Theobroma cacao
Thecc1EG006767 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3644790-3645289 Theobroma cacao
Thecc1EG006767 1.0kb upstream 1.0kb upstream 4778 true scaffold_2: 3645290-3650067 Theobroma cacao
Thecc1EG006767 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3649068-3650067 Theobroma cacao
Thecc1EG006767 1.0kb downstream 1.0kb downstream 4778 true scaffold_2: 3644290-3649067 Theobroma cacao
Thecc1EG006767 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3644290-3645289 Theobroma cacao
Thecc1EG006767 2.0kb upstream 2.0kb upstream 5778 true scaffold_2: 3645290-3651067 Theobroma cacao
Thecc1EG006767 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3649068-3651067 Theobroma cacao
Thecc1EG006767 2.0kb downstream 2.0kb downstream 5778 true scaffold_2: 3643290-3649067 Theobroma cacao
Thecc1EG006767 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3643290-3645289 Theobroma cacao
Thecc1EG006767 5.0kb upstream 5.0kb upstream 8778 true scaffold_2: 3645290-3654067 Theobroma cacao
Thecc1EG006767 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3649068-3654067 Theobroma cacao
Thecc1EG006767 5.0kb downstream 5.0kb downstream 8778 true scaffold_2: 3640290-3649067 Theobroma cacao
Thecc1EG006767 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3640290-3645289 Theobroma cacao
Thecc1EG006767 10.0kb upstream 10.0kb upstream 13778 true scaffold_2: 3645290-3659067 Theobroma cacao
Thecc1EG006767 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3649068-3659067 Theobroma cacao
Thecc1EG006767 10.0kb downstream 10.0kb downstream 13778 true scaffold_2: 3635290-3649067 Theobroma cacao
Thecc1EG006767 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3635290-3645289 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838572 5264 Brassicales-Malvales View MSA
124337369 5266 SBM View MSA
124244703 5268 Malvidae View MSA
124062231 5270 Rosid View MSA
123743599 5271 Pentapetalae View MSA
122787998 5272 Eudicot View MSA
122045937 5273 Angiosperm View MSA
121350358 5274 Embryophyte View MSA
123381694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain