Gene : Thecc1EG006759 T. cacao v1.1

Defline:  (1 of 7) PTHR16007//PTHR16007:SF18 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // SUBFAMILY NOT NAMED Genomic Order:  699
Name:  ? Thecc1EG006759 Secondary Identifier:  ? PAC:27461932

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006759 0.5kb upstream 0.5kb upstream 4599 true scaffold_2: 3613972-3618570 Theobroma cacao
Thecc1EG006759 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3618071-3618570 Theobroma cacao
Thecc1EG006759 0.5kb downstream 0.5kb downstream 4599 true scaffold_2: 3613472-3618070 Theobroma cacao
Thecc1EG006759 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3613472-3613971 Theobroma cacao
Thecc1EG006759 1.0kb upstream 1.0kb upstream 5099 true scaffold_2: 3613972-3619070 Theobroma cacao
Thecc1EG006759 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3618071-3619070 Theobroma cacao
Thecc1EG006759 1.0kb downstream 1.0kb downstream 5099 true scaffold_2: 3612972-3618070 Theobroma cacao
Thecc1EG006759 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3612972-3613971 Theobroma cacao
Thecc1EG006759 2.0kb upstream 2.0kb upstream 6099 true scaffold_2: 3613972-3620070 Theobroma cacao
Thecc1EG006759 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3618071-3620070 Theobroma cacao
Thecc1EG006759 2.0kb downstream 2.0kb downstream 6099 true scaffold_2: 3611972-3618070 Theobroma cacao
Thecc1EG006759 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3611972-3613971 Theobroma cacao
Thecc1EG006759 5.0kb upstream 5.0kb upstream 9099 true scaffold_2: 3613972-3623070 Theobroma cacao
Thecc1EG006759 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3618071-3623070 Theobroma cacao
Thecc1EG006759 5.0kb downstream 5.0kb downstream 9099 true scaffold_2: 3608972-3618070 Theobroma cacao
Thecc1EG006759 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3608972-3613971 Theobroma cacao
Thecc1EG006759 10.0kb upstream 10.0kb upstream 14099 true scaffold_2: 3613972-3628070 Theobroma cacao
Thecc1EG006759 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3618071-3628070 Theobroma cacao
Thecc1EG006759 10.0kb downstream 10.0kb downstream 14099 true scaffold_2: 3603972-3618070 Theobroma cacao
Thecc1EG006759 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3603972-3613971 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027649 5273 Angiosperm View MSA
123838896 5264 Brassicales-Malvales View MSA
124322514 5266 SBM View MSA
124250657 5268 Malvidae View MSA
124071323 5270 Rosid View MSA
123752946 5271 Pentapetalae View MSA
122774876 5272 Eudicot View MSA
121297275 5274 Embryophyte View MSA
123335348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain