Gene : Thecc1EG006755 T. cacao v1.1
Defline:  (1 of 427) PF01535 - PPR repeat (PPR) Genomic Order:  695
Name:  ? Thecc1EG006755 Secondary Identifier:  ? PAC:27459735
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006755 0.5kb upstream 0.5kb upstream 2556 true scaffold_2: 3589399-3591954 Theobroma cacao
Thecc1EG006755 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3589399-3589898 Theobroma cacao
Thecc1EG006755 0.5kb downstream 0.5kb downstream 2556 true scaffold_2: 3589899-3592454 Theobroma cacao
Thecc1EG006755 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3591955-3592454 Theobroma cacao
Thecc1EG006755 1.0kb upstream 1.0kb upstream 3056 true scaffold_2: 3588899-3591954 Theobroma cacao
Thecc1EG006755 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3588899-3589898 Theobroma cacao
Thecc1EG006755 1.0kb downstream 1.0kb downstream 3056 true scaffold_2: 3589899-3592954 Theobroma cacao
Thecc1EG006755 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3591955-3592954 Theobroma cacao
Thecc1EG006755 2.0kb upstream 2.0kb upstream 4056 true scaffold_2: 3587899-3591954 Theobroma cacao
Thecc1EG006755 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3587899-3589898 Theobroma cacao
Thecc1EG006755 2.0kb downstream 2.0kb downstream 4056 true scaffold_2: 3589899-3593954 Theobroma cacao
Thecc1EG006755 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3591955-3593954 Theobroma cacao
Thecc1EG006755 5.0kb upstream 5.0kb upstream 7056 true scaffold_2: 3584899-3591954 Theobroma cacao
Thecc1EG006755 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3584899-3589898 Theobroma cacao
Thecc1EG006755 5.0kb downstream 5.0kb downstream 7056 true scaffold_2: 3589899-3596954 Theobroma cacao
Thecc1EG006755 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3591955-3596954 Theobroma cacao
Thecc1EG006755 10.0kb upstream 10.0kb upstream 12056 true scaffold_2: 3579899-3591954 Theobroma cacao
Thecc1EG006755 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3579899-3589898 Theobroma cacao
Thecc1EG006755 10.0kb downstream 10.0kb downstream 12056 true scaffold_2: 3589899-3601954 Theobroma cacao
Thecc1EG006755 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3591955-3601954 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825534 5264 Brassicales-Malvales View MSA
124348558 5266 SBM View MSA
124247061 5268 Malvidae View MSA
124074689 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain