Gene : Thecc1EG006702 T. cacao v1.1
Defline:  (1 of 1) 3.2.2.16 - Methylthioadenosine nucleosidase / MTA nucleosidase Genomic Order:  650
Name:  ? Thecc1EG006702 Secondary Identifier:  ? PAC:27461062
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6754 Theobroma cacao pathologic  
Tcacao PWY-7270 Theobroma cacao pathologic  
Tcacao PWY-7528 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006702 0.5kb upstream 0.5kb upstream 5100 true scaffold_2: 3394462-3399561 Theobroma cacao
Thecc1EG006702 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3399062-3399561 Theobroma cacao
Thecc1EG006702 0.5kb downstream 0.5kb downstream 5100 true scaffold_2: 3393962-3399061 Theobroma cacao
Thecc1EG006702 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3393962-3394461 Theobroma cacao
Thecc1EG006702 1.0kb upstream 1.0kb upstream 5600 true scaffold_2: 3394462-3400061 Theobroma cacao
Thecc1EG006702 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3399062-3400061 Theobroma cacao
Thecc1EG006702 1.0kb downstream 1.0kb downstream 5600 true scaffold_2: 3393462-3399061 Theobroma cacao
Thecc1EG006702 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3393462-3394461 Theobroma cacao
Thecc1EG006702 2.0kb upstream 2.0kb upstream 6600 true scaffold_2: 3394462-3401061 Theobroma cacao
Thecc1EG006702 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3399062-3401061 Theobroma cacao
Thecc1EG006702 2.0kb downstream 2.0kb downstream 6600 true scaffold_2: 3392462-3399061 Theobroma cacao
Thecc1EG006702 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3392462-3394461 Theobroma cacao
Thecc1EG006702 5.0kb upstream 5.0kb upstream 9600 true scaffold_2: 3394462-3404061 Theobroma cacao
Thecc1EG006702 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3399062-3404061 Theobroma cacao
Thecc1EG006702 5.0kb downstream 5.0kb downstream 9600 true scaffold_2: 3389462-3399061 Theobroma cacao
Thecc1EG006702 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3389462-3394461 Theobroma cacao
Thecc1EG006702 10.0kb upstream 10.0kb upstream 14600 true scaffold_2: 3394462-3409061 Theobroma cacao
Thecc1EG006702 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3399062-3409061 Theobroma cacao
Thecc1EG006702 10.0kb downstream 10.0kb downstream 14600 true scaffold_2: 3384462-3399061 Theobroma cacao
Thecc1EG006702 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3384462-3394461 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837274 5264 Brassicales-Malvales View MSA
124343945 5266 SBM View MSA
124243713 5268 Malvidae View MSA
124068353 5270 Rosid View MSA
123747055 5271 Pentapetalae View MSA
122790949 5272 Eudicot View MSA
122046181 5273 Angiosperm View MSA
121344048 5274 Embryophyte View MSA
123424569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain