Gene : Thecc1EG006701 T. cacao v1.1
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  649
Name:  ? Thecc1EG006701 Secondary Identifier:  ? PAC:27461738
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006701 0.5kb upstream 0.5kb upstream 2479 true scaffold_2: 3392200-3394678 Theobroma cacao
Thecc1EG006701 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3394179-3394678 Theobroma cacao
Thecc1EG006701 0.5kb downstream 0.5kb downstream 2479 true scaffold_2: 3391700-3394178 Theobroma cacao
Thecc1EG006701 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3391700-3392199 Theobroma cacao
Thecc1EG006701 1.0kb upstream 1.0kb upstream 2979 true scaffold_2: 3392200-3395178 Theobroma cacao
Thecc1EG006701 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3394179-3395178 Theobroma cacao
Thecc1EG006701 1.0kb downstream 1.0kb downstream 2979 true scaffold_2: 3391200-3394178 Theobroma cacao
Thecc1EG006701 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3391200-3392199 Theobroma cacao
Thecc1EG006701 2.0kb upstream 2.0kb upstream 3979 true scaffold_2: 3392200-3396178 Theobroma cacao
Thecc1EG006701 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3394179-3396178 Theobroma cacao
Thecc1EG006701 2.0kb downstream 2.0kb downstream 3979 true scaffold_2: 3390200-3394178 Theobroma cacao
Thecc1EG006701 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3390200-3392199 Theobroma cacao
Thecc1EG006701 5.0kb upstream 5.0kb upstream 6979 true scaffold_2: 3392200-3399178 Theobroma cacao
Thecc1EG006701 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3394179-3399178 Theobroma cacao
Thecc1EG006701 5.0kb downstream 5.0kb downstream 6979 true scaffold_2: 3387200-3394178 Theobroma cacao
Thecc1EG006701 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3387200-3392199 Theobroma cacao
Thecc1EG006701 10.0kb upstream 10.0kb upstream 11979 true scaffold_2: 3392200-3404178 Theobroma cacao
Thecc1EG006701 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3394179-3404178 Theobroma cacao
Thecc1EG006701 10.0kb downstream 10.0kb downstream 11979 true scaffold_2: 3382200-3394178 Theobroma cacao
Thecc1EG006701 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3382200-3392199 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828029 5264 Brassicales-Malvales View MSA
124342299 5266 SBM View MSA
124240993 5268 Malvidae View MSA
124063959 5270 Rosid View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain