Gene : Thecc1EG006692 T. cacao v1.1
Defline:  (1 of 2) PTHR23042//PTHR23042:SF70 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR BHLH121 Genomic Order:  640
Name:  ? Thecc1EG006692 Secondary Identifier:  ? PAC:27463112
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006692 0.5kb upstream 0.5kb upstream 3045 true scaffold_2: 3353320-3356364 Theobroma cacao
Thecc1EG006692 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3353320-3353819 Theobroma cacao
Thecc1EG006692 0.5kb downstream 0.5kb downstream 3045 true scaffold_2: 3353820-3356864 Theobroma cacao
Thecc1EG006692 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3356365-3356864 Theobroma cacao
Thecc1EG006692 1.0kb upstream 1.0kb upstream 3545 true scaffold_2: 3352820-3356364 Theobroma cacao
Thecc1EG006692 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3352820-3353819 Theobroma cacao
Thecc1EG006692 1.0kb downstream 1.0kb downstream 3545 true scaffold_2: 3353820-3357364 Theobroma cacao
Thecc1EG006692 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3356365-3357364 Theobroma cacao
Thecc1EG006692 2.0kb upstream 2.0kb upstream 4545 true scaffold_2: 3351820-3356364 Theobroma cacao
Thecc1EG006692 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3351820-3353819 Theobroma cacao
Thecc1EG006692 2.0kb downstream 2.0kb downstream 4545 true scaffold_2: 3353820-3358364 Theobroma cacao
Thecc1EG006692 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3356365-3358364 Theobroma cacao
Thecc1EG006692 5.0kb upstream 5.0kb upstream 7545 true scaffold_2: 3348820-3356364 Theobroma cacao
Thecc1EG006692 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3348820-3353819 Theobroma cacao
Thecc1EG006692 5.0kb downstream 5.0kb downstream 7545 true scaffold_2: 3353820-3361364 Theobroma cacao
Thecc1EG006692 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3356365-3361364 Theobroma cacao
Thecc1EG006692 10.0kb upstream 10.0kb upstream 12545 true scaffold_2: 3343820-3356364 Theobroma cacao
Thecc1EG006692 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3343820-3353819 Theobroma cacao
Thecc1EG006692 10.0kb downstream 10.0kb downstream 12545 true scaffold_2: 3353820-3366364 Theobroma cacao
Thecc1EG006692 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3356365-3366364 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828806 5264 Brassicales-Malvales View MSA
124338815 5266 SBM View MSA
124253718 5268 Malvidae View MSA
124070244 5270 Rosid View MSA
123741590 5271 Pentapetalae View MSA
122787176 5272 Eudicot View MSA
122044720 5273 Angiosperm View MSA
121351586 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain