Gene : Thecc1EG006685 T. cacao v1.1
Defline:  (1 of 1) PTHR32091:SF5 - GLYCINE-RICH PROTEIN Genomic Order:  633
Name:  ? Thecc1EG006685 Secondary Identifier:  ? PAC:27464533
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006685 0.5kb upstream 0.5kb upstream 3568 true scaffold_2: 3306193-3309760 Theobroma cacao
Thecc1EG006685 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3309261-3309760 Theobroma cacao
Thecc1EG006685 0.5kb downstream 0.5kb downstream 3568 true scaffold_2: 3305693-3309260 Theobroma cacao
Thecc1EG006685 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3305693-3306192 Theobroma cacao
Thecc1EG006685 1.0kb upstream 1.0kb upstream 4068 true scaffold_2: 3306193-3310260 Theobroma cacao
Thecc1EG006685 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3309261-3310260 Theobroma cacao
Thecc1EG006685 1.0kb downstream 1.0kb downstream 4068 true scaffold_2: 3305193-3309260 Theobroma cacao
Thecc1EG006685 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3305193-3306192 Theobroma cacao
Thecc1EG006685 2.0kb upstream 2.0kb upstream 5068 true scaffold_2: 3306193-3311260 Theobroma cacao
Thecc1EG006685 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3309261-3311260 Theobroma cacao
Thecc1EG006685 2.0kb downstream 2.0kb downstream 5068 true scaffold_2: 3304193-3309260 Theobroma cacao
Thecc1EG006685 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3304193-3306192 Theobroma cacao
Thecc1EG006685 5.0kb upstream 5.0kb upstream 8068 true scaffold_2: 3306193-3314260 Theobroma cacao
Thecc1EG006685 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3309261-3314260 Theobroma cacao
Thecc1EG006685 5.0kb downstream 5.0kb downstream 8068 true scaffold_2: 3301193-3309260 Theobroma cacao
Thecc1EG006685 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3301193-3306192 Theobroma cacao
Thecc1EG006685 10.0kb upstream 10.0kb upstream 13068 true scaffold_2: 3306193-3319260 Theobroma cacao
Thecc1EG006685 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3309261-3319260 Theobroma cacao
Thecc1EG006685 10.0kb downstream 10.0kb downstream 13068 true scaffold_2: 3296193-3309260 Theobroma cacao
Thecc1EG006685 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3296193-3306192 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831124 5264 Brassicales-Malvales View MSA
124351625 5266 SBM View MSA
124253250 5268 Malvidae View MSA
124068960 5270 Rosid View MSA
123736646 5271 Pentapetalae View MSA
122769870 5272 Eudicot View MSA
122051385 5273 Angiosperm View MSA
121351135 5274 Embryophyte View MSA
123426003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain