Gene : Thecc1EG006932 T. cacao v1.1

Defline:  (1 of 1) PTHR12832 - TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 Genomic Order:  852
Name:  ? Thecc1EG006932 Secondary Identifier:  ? PAC:27460728

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006932 0.5kb upstream 0.5kb upstream 10016 true scaffold_2: 4522508-4532523 Theobroma cacao
Thecc1EG006932 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4522508-4523007 Theobroma cacao
Thecc1EG006932 0.5kb downstream 0.5kb downstream 10016 true scaffold_2: 4523008-4533023 Theobroma cacao
Thecc1EG006932 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4532524-4533023 Theobroma cacao
Thecc1EG006932 1.0kb upstream 1.0kb upstream 10516 true scaffold_2: 4522008-4532523 Theobroma cacao
Thecc1EG006932 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4522008-4523007 Theobroma cacao
Thecc1EG006932 1.0kb downstream 1.0kb downstream 10516 true scaffold_2: 4523008-4533523 Theobroma cacao
Thecc1EG006932 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4532524-4533523 Theobroma cacao
Thecc1EG006932 2.0kb upstream 2.0kb upstream 11516 true scaffold_2: 4521008-4532523 Theobroma cacao
Thecc1EG006932 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4521008-4523007 Theobroma cacao
Thecc1EG006932 2.0kb downstream 2.0kb downstream 11516 true scaffold_2: 4523008-4534523 Theobroma cacao
Thecc1EG006932 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4532524-4534523 Theobroma cacao
Thecc1EG006932 5.0kb upstream 5.0kb upstream 14516 true scaffold_2: 4518008-4532523 Theobroma cacao
Thecc1EG006932 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4518008-4523007 Theobroma cacao
Thecc1EG006932 5.0kb downstream 5.0kb downstream 14516 true scaffold_2: 4523008-4537523 Theobroma cacao
Thecc1EG006932 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4532524-4537523 Theobroma cacao
Thecc1EG006932 10.0kb upstream 10.0kb upstream 19516 true scaffold_2: 4513008-4532523 Theobroma cacao
Thecc1EG006932 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4513008-4523007 Theobroma cacao
Thecc1EG006932 10.0kb downstream 10.0kb downstream 19516 true scaffold_2: 4523008-4542523 Theobroma cacao
Thecc1EG006932 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4532524-4542523 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836095 5264 Brassicales-Malvales View MSA
124346419 5266 SBM View MSA
124240744 5268 Malvidae View MSA
124065811 5270 Rosid View MSA
123746081 5271 Pentapetalae View MSA
122792060 5272 Eudicot View MSA
122043242 5273 Angiosperm View MSA
121345323 5274 Embryophyte View MSA
123426758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain