Gene : Thecc1EG006888 T. cacao v1.1
Defline:  (1 of 1) PTHR13068//PTHR13068:SF4 - CGI-12 PROTEIN-RELATED // TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  812
Name:  ? Thecc1EG006888 Secondary Identifier:  ? PAC:27464804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006888 0.5kb upstream 0.5kb upstream 5108 true scaffold_2: 4302305-4307412 Theobroma cacao
Thecc1EG006888 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4302305-4302804 Theobroma cacao
Thecc1EG006888 0.5kb downstream 0.5kb downstream 5108 true scaffold_2: 4302805-4307912 Theobroma cacao
Thecc1EG006888 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4307413-4307912 Theobroma cacao
Thecc1EG006888 1.0kb upstream 1.0kb upstream 5608 true scaffold_2: 4301805-4307412 Theobroma cacao
Thecc1EG006888 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4301805-4302804 Theobroma cacao
Thecc1EG006888 1.0kb downstream 1.0kb downstream 5608 true scaffold_2: 4302805-4308412 Theobroma cacao
Thecc1EG006888 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4307413-4308412 Theobroma cacao
Thecc1EG006888 2.0kb upstream 2.0kb upstream 6608 true scaffold_2: 4300805-4307412 Theobroma cacao
Thecc1EG006888 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4300805-4302804 Theobroma cacao
Thecc1EG006888 2.0kb downstream 2.0kb downstream 6608 true scaffold_2: 4302805-4309412 Theobroma cacao
Thecc1EG006888 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4307413-4309412 Theobroma cacao
Thecc1EG006888 5.0kb upstream 5.0kb upstream 9608 true scaffold_2: 4297805-4307412 Theobroma cacao
Thecc1EG006888 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4297805-4302804 Theobroma cacao
Thecc1EG006888 5.0kb downstream 5.0kb downstream 9608 true scaffold_2: 4302805-4312412 Theobroma cacao
Thecc1EG006888 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4307413-4312412 Theobroma cacao
Thecc1EG006888 10.0kb upstream 10.0kb upstream 14608 true scaffold_2: 4292805-4307412 Theobroma cacao
Thecc1EG006888 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4292805-4302804 Theobroma cacao
Thecc1EG006888 10.0kb downstream 10.0kb downstream 14608 true scaffold_2: 4302805-4317412 Theobroma cacao
Thecc1EG006888 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4307413-4317412 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829664 5264 Brassicales-Malvales View MSA
124343214 5266 SBM View MSA
124238191 5268 Malvidae View MSA
124068588 5270 Rosid View MSA
123748768 5271 Pentapetalae View MSA
122785752 5272 Eudicot View MSA
122044224 5273 Angiosperm View MSA
121347901 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain