Gene : Thecc1EG006859 T. cacao v1.1
Defline:  (1 of 4) PTHR10743 - PROTEIN RER1 Genomic Order:  788
Name:  ? Thecc1EG006859 Secondary Identifier:  ? PAC:27460658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006859 0.5kb upstream 0.5kb upstream 3695 true scaffold_2: 4163348-4167042 Theobroma cacao
Thecc1EG006859 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4163348-4163847 Theobroma cacao
Thecc1EG006859 0.5kb downstream 0.5kb downstream 3695 true scaffold_2: 4163848-4167542 Theobroma cacao
Thecc1EG006859 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4167043-4167542 Theobroma cacao
Thecc1EG006859 1.0kb upstream 1.0kb upstream 4195 true scaffold_2: 4162848-4167042 Theobroma cacao
Thecc1EG006859 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4162848-4163847 Theobroma cacao
Thecc1EG006859 1.0kb downstream 1.0kb downstream 4195 true scaffold_2: 4163848-4168042 Theobroma cacao
Thecc1EG006859 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4167043-4168042 Theobroma cacao
Thecc1EG006859 2.0kb upstream 2.0kb upstream 5195 true scaffold_2: 4161848-4167042 Theobroma cacao
Thecc1EG006859 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4161848-4163847 Theobroma cacao
Thecc1EG006859 2.0kb downstream 2.0kb downstream 5195 true scaffold_2: 4163848-4169042 Theobroma cacao
Thecc1EG006859 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4167043-4169042 Theobroma cacao
Thecc1EG006859 5.0kb upstream 5.0kb upstream 8195 true scaffold_2: 4158848-4167042 Theobroma cacao
Thecc1EG006859 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4158848-4163847 Theobroma cacao
Thecc1EG006859 5.0kb downstream 5.0kb downstream 8195 true scaffold_2: 4163848-4172042 Theobroma cacao
Thecc1EG006859 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4167043-4172042 Theobroma cacao
Thecc1EG006859 10.0kb upstream 10.0kb upstream 13195 true scaffold_2: 4153848-4167042 Theobroma cacao
Thecc1EG006859 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4153848-4163847 Theobroma cacao
Thecc1EG006859 10.0kb downstream 10.0kb downstream 13195 true scaffold_2: 4163848-4177042 Theobroma cacao
Thecc1EG006859 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4167043-4177042 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841246 5264 Brassicales-Malvales View MSA
124338953 5266 SBM View MSA
124253453 5268 Malvidae View MSA
124071881 5270 Rosid View MSA
123745031 5271 Pentapetalae View MSA
122794273 5272 Eudicot View MSA
122048346 5273 Angiosperm View MSA
121345453 5274 Embryophyte View MSA
123424083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain