Gene : Thecc1EG006845 T. cacao v1.1

Defline:  (1 of 2) PTHR23070//PTHR23070:SF32 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  774
Name:  ? Thecc1EG006845 Secondary Identifier:  ? PAC:27464473

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006845 0.5kb upstream 0.5kb upstream 3525 true scaffold_2: 4091562-4095086 Theobroma cacao
Thecc1EG006845 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4094587-4095086 Theobroma cacao
Thecc1EG006845 0.5kb downstream 0.5kb downstream 3525 true scaffold_2: 4091062-4094586 Theobroma cacao
Thecc1EG006845 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4091062-4091561 Theobroma cacao
Thecc1EG006845 1.0kb upstream 1.0kb upstream 4025 true scaffold_2: 4091562-4095586 Theobroma cacao
Thecc1EG006845 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4094587-4095586 Theobroma cacao
Thecc1EG006845 1.0kb downstream 1.0kb downstream 4025 true scaffold_2: 4090562-4094586 Theobroma cacao
Thecc1EG006845 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4090562-4091561 Theobroma cacao
Thecc1EG006845 2.0kb upstream 2.0kb upstream 5025 true scaffold_2: 4091562-4096586 Theobroma cacao
Thecc1EG006845 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4094587-4096586 Theobroma cacao
Thecc1EG006845 2.0kb downstream 2.0kb downstream 5025 true scaffold_2: 4089562-4094586 Theobroma cacao
Thecc1EG006845 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4089562-4091561 Theobroma cacao
Thecc1EG006845 5.0kb upstream 5.0kb upstream 8025 true scaffold_2: 4091562-4099586 Theobroma cacao
Thecc1EG006845 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4094587-4099586 Theobroma cacao
Thecc1EG006845 5.0kb downstream 5.0kb downstream 8025 true scaffold_2: 4086562-4094586 Theobroma cacao
Thecc1EG006845 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4086562-4091561 Theobroma cacao
Thecc1EG006845 10.0kb upstream 10.0kb upstream 13025 true scaffold_2: 4091562-4104586 Theobroma cacao
Thecc1EG006845 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4094587-4104586 Theobroma cacao
Thecc1EG006845 10.0kb downstream 10.0kb downstream 13025 true scaffold_2: 4081562-4094586 Theobroma cacao
Thecc1EG006845 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4081562-4091561 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840908 5264 Brassicales-Malvales View MSA
124350901 5266 SBM View MSA
124246593 5268 Malvidae View MSA
124072397 5270 Rosid View MSA
123747421 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain