Gene : Thecc1EG006843 T. cacao v1.1
Defline:  (1 of 1) 4.1.1.20 - Diaminopimelate decarboxylase / Meso-2,6-diaminoheptanedioate carboxy-lyase Genomic Order:  772
Name:  ? Thecc1EG006843 Secondary Identifier:  ? PAC:27461544
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5097 Theobroma cacao pathologic  
Tcacao PWY-724 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006843 0.5kb upstream 0.5kb upstream 6718 true scaffold_2: 4076885-4083602 Theobroma cacao
Thecc1EG006843 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4076885-4077384 Theobroma cacao
Thecc1EG006843 0.5kb downstream 0.5kb downstream 6718 true scaffold_2: 4077385-4084102 Theobroma cacao
Thecc1EG006843 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4083603-4084102 Theobroma cacao
Thecc1EG006843 1.0kb upstream 1.0kb upstream 7218 true scaffold_2: 4076385-4083602 Theobroma cacao
Thecc1EG006843 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4076385-4077384 Theobroma cacao
Thecc1EG006843 1.0kb downstream 1.0kb downstream 7218 true scaffold_2: 4077385-4084602 Theobroma cacao
Thecc1EG006843 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4083603-4084602 Theobroma cacao
Thecc1EG006843 2.0kb upstream 2.0kb upstream 8218 true scaffold_2: 4075385-4083602 Theobroma cacao
Thecc1EG006843 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4075385-4077384 Theobroma cacao
Thecc1EG006843 2.0kb downstream 2.0kb downstream 8218 true scaffold_2: 4077385-4085602 Theobroma cacao
Thecc1EG006843 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4083603-4085602 Theobroma cacao
Thecc1EG006843 5.0kb upstream 5.0kb upstream 11218 true scaffold_2: 4072385-4083602 Theobroma cacao
Thecc1EG006843 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4072385-4077384 Theobroma cacao
Thecc1EG006843 5.0kb downstream 5.0kb downstream 11218 true scaffold_2: 4077385-4088602 Theobroma cacao
Thecc1EG006843 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4083603-4088602 Theobroma cacao
Thecc1EG006843 10.0kb upstream 10.0kb upstream 16218 true scaffold_2: 4067385-4083602 Theobroma cacao
Thecc1EG006843 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4067385-4077384 Theobroma cacao
Thecc1EG006843 10.0kb downstream 10.0kb downstream 16218 true scaffold_2: 4077385-4093602 Theobroma cacao
Thecc1EG006843 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4083603-4093602 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841462 5264 Brassicales-Malvales View MSA
124337243 5266 SBM View MSA
124250091 5268 Malvidae View MSA
124070276 5270 Rosid View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain