Gene : Thecc1EG007084 T. cacao v1.1
Defline:  (1 of 2) K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) Genomic Order:  989
Name:  ? Thecc1EG007084 Secondary Identifier:  ? PAC:27460403
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007084 0.5kb upstream 0.5kb upstream 8805 true scaffold_2: 5207423-5216227 Theobroma cacao
Thecc1EG007084 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5215728-5216227 Theobroma cacao
Thecc1EG007084 0.5kb downstream 0.5kb downstream 8805 true scaffold_2: 5206923-5215727 Theobroma cacao
Thecc1EG007084 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5206923-5207422 Theobroma cacao
Thecc1EG007084 1.0kb upstream 1.0kb upstream 9305 true scaffold_2: 5207423-5216727 Theobroma cacao
Thecc1EG007084 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5215728-5216727 Theobroma cacao
Thecc1EG007084 1.0kb downstream 1.0kb downstream 9305 true scaffold_2: 5206423-5215727 Theobroma cacao
Thecc1EG007084 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5206423-5207422 Theobroma cacao
Thecc1EG007084 2.0kb upstream 2.0kb upstream 10305 true scaffold_2: 5207423-5217727 Theobroma cacao
Thecc1EG007084 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5215728-5217727 Theobroma cacao
Thecc1EG007084 2.0kb downstream 2.0kb downstream 10305 true scaffold_2: 5205423-5215727 Theobroma cacao
Thecc1EG007084 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5205423-5207422 Theobroma cacao
Thecc1EG007084 5.0kb upstream 5.0kb upstream 13305 true scaffold_2: 5207423-5220727 Theobroma cacao
Thecc1EG007084 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5215728-5220727 Theobroma cacao
Thecc1EG007084 5.0kb downstream 5.0kb downstream 13305 true scaffold_2: 5202423-5215727 Theobroma cacao
Thecc1EG007084 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5202423-5207422 Theobroma cacao
Thecc1EG007084 10.0kb upstream 10.0kb upstream 18305 true scaffold_2: 5207423-5225727 Theobroma cacao
Thecc1EG007084 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5215728-5225727 Theobroma cacao
Thecc1EG007084 10.0kb downstream 10.0kb downstream 18305 true scaffold_2: 5197423-5215727 Theobroma cacao
Thecc1EG007084 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5197423-5207422 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834776 5264 Brassicales-Malvales View MSA
124338883 5266 SBM View MSA
124236828 5268 Malvidae View MSA
124067638 5270 Rosid View MSA
123751364 5271 Pentapetalae View MSA
122793070 5272 Eudicot View MSA
122041627 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351500 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain