Gene : Thecc1EG007055 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  964
Name:  ? Thecc1EG007055 Secondary Identifier:  ? PAC:27460450
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007055 0.5kb upstream 0.5kb upstream 2910 true scaffold_2: 5052550-5055459 Theobroma cacao
Thecc1EG007055 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5052550-5053049 Theobroma cacao
Thecc1EG007055 0.5kb downstream 0.5kb downstream 2910 true scaffold_2: 5053050-5055959 Theobroma cacao
Thecc1EG007055 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5055460-5055959 Theobroma cacao
Thecc1EG007055 1.0kb upstream 1.0kb upstream 3410 true scaffold_2: 5052050-5055459 Theobroma cacao
Thecc1EG007055 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5052050-5053049 Theobroma cacao
Thecc1EG007055 1.0kb downstream 1.0kb downstream 3410 true scaffold_2: 5053050-5056459 Theobroma cacao
Thecc1EG007055 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5055460-5056459 Theobroma cacao
Thecc1EG007055 2.0kb upstream 2.0kb upstream 4410 true scaffold_2: 5051050-5055459 Theobroma cacao
Thecc1EG007055 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5051050-5053049 Theobroma cacao
Thecc1EG007055 2.0kb downstream 2.0kb downstream 4410 true scaffold_2: 5053050-5057459 Theobroma cacao
Thecc1EG007055 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5055460-5057459 Theobroma cacao
Thecc1EG007055 5.0kb upstream 5.0kb upstream 7410 true scaffold_2: 5048050-5055459 Theobroma cacao
Thecc1EG007055 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5048050-5053049 Theobroma cacao
Thecc1EG007055 5.0kb downstream 5.0kb downstream 7410 true scaffold_2: 5053050-5060459 Theobroma cacao
Thecc1EG007055 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5055460-5060459 Theobroma cacao
Thecc1EG007055 10.0kb upstream 10.0kb upstream 12410 true scaffold_2: 5043050-5055459 Theobroma cacao
Thecc1EG007055 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5043050-5053049 Theobroma cacao
Thecc1EG007055 10.0kb downstream 10.0kb downstream 12410 true scaffold_2: 5053050-5065459 Theobroma cacao
Thecc1EG007055 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5055460-5065459 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830283 5264 Brassicales-Malvales View MSA
124339198 5266 SBM View MSA
124240083 5268 Malvidae View MSA
124068525 5270 Rosid View MSA
123750280 5271 Pentapetalae View MSA
122796437 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain