Gene : Thecc1EG007044 T. cacao v1.1
Defline:  (1 of 4) K10875 - DNA repair and recombination protein RAD54 and RAD54-like protein (RAD54L, RAD54) Genomic Order:  955
Name:  ? Thecc1EG007044 Secondary Identifier:  ? PAC:27459730
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007044 0.5kb upstream 0.5kb upstream 8922 true scaffold_2: 4999599-5008520 Theobroma cacao
Thecc1EG007044 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5008021-5008520 Theobroma cacao
Thecc1EG007044 0.5kb downstream 0.5kb downstream 8922 true scaffold_2: 4999099-5008020 Theobroma cacao
Thecc1EG007044 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4999099-4999598 Theobroma cacao
Thecc1EG007044 1.0kb upstream 1.0kb upstream 9422 true scaffold_2: 4999599-5009020 Theobroma cacao
Thecc1EG007044 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5008021-5009020 Theobroma cacao
Thecc1EG007044 1.0kb downstream 1.0kb downstream 9422 true scaffold_2: 4998599-5008020 Theobroma cacao
Thecc1EG007044 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4998599-4999598 Theobroma cacao
Thecc1EG007044 2.0kb upstream 2.0kb upstream 10422 true scaffold_2: 4999599-5010020 Theobroma cacao
Thecc1EG007044 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5008021-5010020 Theobroma cacao
Thecc1EG007044 2.0kb downstream 2.0kb downstream 10422 true scaffold_2: 4997599-5008020 Theobroma cacao
Thecc1EG007044 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4997599-4999598 Theobroma cacao
Thecc1EG007044 5.0kb upstream 5.0kb upstream 13422 true scaffold_2: 4999599-5013020 Theobroma cacao
Thecc1EG007044 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5008021-5013020 Theobroma cacao
Thecc1EG007044 5.0kb downstream 5.0kb downstream 13422 true scaffold_2: 4994599-5008020 Theobroma cacao
Thecc1EG007044 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4994599-4999598 Theobroma cacao
Thecc1EG007044 10.0kb upstream 10.0kb upstream 18422 true scaffold_2: 4999599-5018020 Theobroma cacao
Thecc1EG007044 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5008021-5018020 Theobroma cacao
Thecc1EG007044 10.0kb downstream 10.0kb downstream 18422 true scaffold_2: 4989599-5008020 Theobroma cacao
Thecc1EG007044 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4989599-4999598 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833355 5264 Brassicales-Malvales View MSA
124345572 5266 SBM View MSA
124240545 5268 Malvidae View MSA
124063199 5270 Rosid View MSA
123739841 5271 Pentapetalae View MSA
122786918 5272 Eudicot View MSA
122047052 5273 Angiosperm View MSA
121348350 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain