Gene : Thecc1EG007031 T. cacao v1.1

Defline:  (1 of 1) K06972 - uncharacterized protein (K06972) Genomic Order:  944
Name:  ? Thecc1EG007031 Secondary Identifier:  ? PAC:27463697

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007031 0.5kb upstream 0.5kb upstream 9571 true scaffold_2: 4929085-4938655 Theobroma cacao
Thecc1EG007031 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4929085-4929584 Theobroma cacao
Thecc1EG007031 0.5kb downstream 0.5kb downstream 9571 true scaffold_2: 4929585-4939155 Theobroma cacao
Thecc1EG007031 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4938656-4939155 Theobroma cacao
Thecc1EG007031 1.0kb upstream 1.0kb upstream 10071 true scaffold_2: 4928585-4938655 Theobroma cacao
Thecc1EG007031 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4928585-4929584 Theobroma cacao
Thecc1EG007031 1.0kb downstream 1.0kb downstream 10071 true scaffold_2: 4929585-4939655 Theobroma cacao
Thecc1EG007031 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4938656-4939655 Theobroma cacao
Thecc1EG007031 2.0kb upstream 2.0kb upstream 11071 true scaffold_2: 4927585-4938655 Theobroma cacao
Thecc1EG007031 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4927585-4929584 Theobroma cacao
Thecc1EG007031 2.0kb downstream 2.0kb downstream 11071 true scaffold_2: 4929585-4940655 Theobroma cacao
Thecc1EG007031 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4938656-4940655 Theobroma cacao
Thecc1EG007031 5.0kb upstream 5.0kb upstream 14071 true scaffold_2: 4924585-4938655 Theobroma cacao
Thecc1EG007031 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4924585-4929584 Theobroma cacao
Thecc1EG007031 5.0kb downstream 5.0kb downstream 14071 true scaffold_2: 4929585-4943655 Theobroma cacao
Thecc1EG007031 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4938656-4943655 Theobroma cacao
Thecc1EG007031 10.0kb upstream 10.0kb upstream 19071 true scaffold_2: 4919585-4938655 Theobroma cacao
Thecc1EG007031 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4919585-4929584 Theobroma cacao
Thecc1EG007031 10.0kb downstream 10.0kb downstream 19071 true scaffold_2: 4929585-4948655 Theobroma cacao
Thecc1EG007031 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4938656-4948655 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836857 5264 Brassicales-Malvales View MSA
124338664 5266 SBM View MSA
124243090 5268 Malvidae View MSA
124061044 5270 Rosid View MSA
123737107 5271 Pentapetalae View MSA
122792792 5272 Eudicot View MSA
122042751 5273 Angiosperm View MSA
121343874 5274 Embryophyte View MSA
123424762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain