Gene : Thecc1EG007015 T. cacao v1.1
Defline:  (1 of 467) PF13041 - PPR repeat family (PPR_2) Genomic Order:  931
Name:  ? Thecc1EG007015 Secondary Identifier:  ? PAC:27460555
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007015 0.5kb upstream 0.5kb upstream 3595 true scaffold_2: 4866062-4869656 Theobroma cacao
Thecc1EG007015 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4866062-4866561 Theobroma cacao
Thecc1EG007015 0.5kb downstream 0.5kb downstream 3595 true scaffold_2: 4866562-4870156 Theobroma cacao
Thecc1EG007015 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4869657-4870156 Theobroma cacao
Thecc1EG007015 1.0kb upstream 1.0kb upstream 4095 true scaffold_2: 4865562-4869656 Theobroma cacao
Thecc1EG007015 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4865562-4866561 Theobroma cacao
Thecc1EG007015 1.0kb downstream 1.0kb downstream 4095 true scaffold_2: 4866562-4870656 Theobroma cacao
Thecc1EG007015 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4869657-4870656 Theobroma cacao
Thecc1EG007015 2.0kb upstream 2.0kb upstream 5095 true scaffold_2: 4864562-4869656 Theobroma cacao
Thecc1EG007015 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4864562-4866561 Theobroma cacao
Thecc1EG007015 2.0kb downstream 2.0kb downstream 5095 true scaffold_2: 4866562-4871656 Theobroma cacao
Thecc1EG007015 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4869657-4871656 Theobroma cacao
Thecc1EG007015 5.0kb upstream 5.0kb upstream 8095 true scaffold_2: 4861562-4869656 Theobroma cacao
Thecc1EG007015 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4861562-4866561 Theobroma cacao
Thecc1EG007015 5.0kb downstream 5.0kb downstream 8095 true scaffold_2: 4866562-4874656 Theobroma cacao
Thecc1EG007015 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4869657-4874656 Theobroma cacao
Thecc1EG007015 10.0kb upstream 10.0kb upstream 13095 true scaffold_2: 4856562-4869656 Theobroma cacao
Thecc1EG007015 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4856562-4866561 Theobroma cacao
Thecc1EG007015 10.0kb downstream 10.0kb downstream 13095 true scaffold_2: 4866562-4879656 Theobroma cacao
Thecc1EG007015 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4869657-4879656 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841705 5264 Brassicales-Malvales View MSA
124337529 5266 SBM View MSA
124244878 5268 Malvidae View MSA
124063635 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain