Gene : Thecc1EG007003 T. cacao v1.1

Defline:  (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Genomic Order:  920
Name:  ? Thecc1EG007003 Secondary Identifier:  ? PAC:27461691

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007003 0.5kb upstream 0.5kb upstream 5741 true scaffold_2: 4804392-4810132 Theobroma cacao
Thecc1EG007003 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4804392-4804891 Theobroma cacao
Thecc1EG007003 0.5kb downstream 0.5kb downstream 5741 true scaffold_2: 4804892-4810632 Theobroma cacao
Thecc1EG007003 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4810133-4810632 Theobroma cacao
Thecc1EG007003 1.0kb upstream 1.0kb upstream 6241 true scaffold_2: 4803892-4810132 Theobroma cacao
Thecc1EG007003 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4803892-4804891 Theobroma cacao
Thecc1EG007003 1.0kb downstream 1.0kb downstream 6241 true scaffold_2: 4804892-4811132 Theobroma cacao
Thecc1EG007003 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4810133-4811132 Theobroma cacao
Thecc1EG007003 2.0kb upstream 2.0kb upstream 7241 true scaffold_2: 4802892-4810132 Theobroma cacao
Thecc1EG007003 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4802892-4804891 Theobroma cacao
Thecc1EG007003 2.0kb downstream 2.0kb downstream 7241 true scaffold_2: 4804892-4812132 Theobroma cacao
Thecc1EG007003 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4810133-4812132 Theobroma cacao
Thecc1EG007003 5.0kb upstream 5.0kb upstream 10241 true scaffold_2: 4799892-4810132 Theobroma cacao
Thecc1EG007003 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4799892-4804891 Theobroma cacao
Thecc1EG007003 5.0kb downstream 5.0kb downstream 10241 true scaffold_2: 4804892-4815132 Theobroma cacao
Thecc1EG007003 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4810133-4815132 Theobroma cacao
Thecc1EG007003 10.0kb upstream 10.0kb upstream 15241 true scaffold_2: 4794892-4810132 Theobroma cacao
Thecc1EG007003 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4794892-4804891 Theobroma cacao
Thecc1EG007003 10.0kb downstream 10.0kb downstream 15241 true scaffold_2: 4804892-4820132 Theobroma cacao
Thecc1EG007003 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4810133-4820132 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836963 5264 Brassicales-Malvales View MSA
124346930 5266 SBM View MSA
124253561 5268 Malvidae View MSA
124069399 5270 Rosid View MSA
123742275 5271 Pentapetalae View MSA
122795031 5272 Eudicot View MSA
122048372 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121348447 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain