Gene : Thecc1EG006998 T. cacao v1.1
Defline:  (1 of 1) PTHR31003//PTHR31003:SF7 - MYB FAMILY TRANSCRIPTION FACTOR // F14J22.20 PROTEIN Genomic Order:  915
Name:  ? Thecc1EG006998 Secondary Identifier:  ? PAC:27460147
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006998 0.5kb upstream 0.5kb upstream 3895 true scaffold_2: 4782087-4785981 Theobroma cacao
Thecc1EG006998 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4782087-4782586 Theobroma cacao
Thecc1EG006998 0.5kb downstream 0.5kb downstream 3895 true scaffold_2: 4782587-4786481 Theobroma cacao
Thecc1EG006998 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4785982-4786481 Theobroma cacao
Thecc1EG006998 1.0kb upstream 1.0kb upstream 4395 true scaffold_2: 4781587-4785981 Theobroma cacao
Thecc1EG006998 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4781587-4782586 Theobroma cacao
Thecc1EG006998 1.0kb downstream 1.0kb downstream 4395 true scaffold_2: 4782587-4786981 Theobroma cacao
Thecc1EG006998 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4785982-4786981 Theobroma cacao
Thecc1EG006998 2.0kb upstream 2.0kb upstream 5395 true scaffold_2: 4780587-4785981 Theobroma cacao
Thecc1EG006998 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4780587-4782586 Theobroma cacao
Thecc1EG006998 2.0kb downstream 2.0kb downstream 5395 true scaffold_2: 4782587-4787981 Theobroma cacao
Thecc1EG006998 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4785982-4787981 Theobroma cacao
Thecc1EG006998 5.0kb upstream 5.0kb upstream 8395 true scaffold_2: 4777587-4785981 Theobroma cacao
Thecc1EG006998 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4777587-4782586 Theobroma cacao
Thecc1EG006998 5.0kb downstream 5.0kb downstream 8395 true scaffold_2: 4782587-4790981 Theobroma cacao
Thecc1EG006998 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4785982-4790981 Theobroma cacao
Thecc1EG006998 10.0kb upstream 10.0kb upstream 13395 true scaffold_2: 4772587-4785981 Theobroma cacao
Thecc1EG006998 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4772587-4782586 Theobroma cacao
Thecc1EG006998 10.0kb downstream 10.0kb downstream 13395 true scaffold_2: 4782587-4795981 Theobroma cacao
Thecc1EG006998 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4785982-4795981 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840622 5264 Brassicales-Malvales View MSA
124348347 5266 SBM View MSA
124251556 5268 Malvidae View MSA
124070700 5270 Rosid View MSA
123742212 5271 Pentapetalae View MSA
122792121 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain