Gene : Thecc1EG007225 T. cacao v1.1
Defline:  (1 of 3) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR Genomic Order:  1118
Name:  ? Thecc1EG007225 Secondary Identifier:  ? PAC:27460930
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007225 0.5kb upstream 0.5kb upstream 4259 true scaffold_2: 5884505-5888763 Theobroma cacao
Thecc1EG007225 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5888264-5888763 Theobroma cacao
Thecc1EG007225 0.5kb downstream 0.5kb downstream 4259 true scaffold_2: 5884005-5888263 Theobroma cacao
Thecc1EG007225 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5884005-5884504 Theobroma cacao
Thecc1EG007225 1.0kb upstream 1.0kb upstream 4759 true scaffold_2: 5884505-5889263 Theobroma cacao
Thecc1EG007225 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5888264-5889263 Theobroma cacao
Thecc1EG007225 1.0kb downstream 1.0kb downstream 4759 true scaffold_2: 5883505-5888263 Theobroma cacao
Thecc1EG007225 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5883505-5884504 Theobroma cacao
Thecc1EG007225 2.0kb upstream 2.0kb upstream 5759 true scaffold_2: 5884505-5890263 Theobroma cacao
Thecc1EG007225 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5888264-5890263 Theobroma cacao
Thecc1EG007225 2.0kb downstream 2.0kb downstream 5759 true scaffold_2: 5882505-5888263 Theobroma cacao
Thecc1EG007225 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5882505-5884504 Theobroma cacao
Thecc1EG007225 5.0kb upstream 5.0kb upstream 8759 true scaffold_2: 5884505-5893263 Theobroma cacao
Thecc1EG007225 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5888264-5893263 Theobroma cacao
Thecc1EG007225 5.0kb downstream 5.0kb downstream 8759 true scaffold_2: 5879505-5888263 Theobroma cacao
Thecc1EG007225 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5879505-5884504 Theobroma cacao
Thecc1EG007225 10.0kb upstream 10.0kb upstream 13759 true scaffold_2: 5884505-5898263 Theobroma cacao
Thecc1EG007225 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5888264-5898263 Theobroma cacao
Thecc1EG007225 10.0kb downstream 10.0kb downstream 13759 true scaffold_2: 5874505-5888263 Theobroma cacao
Thecc1EG007225 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5874505-5884504 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665644 5273 Angiosperm View MSA
123824561 5264 Brassicales-Malvales View MSA
124320231 5266 SBM View MSA
124249205 5268 Malvidae View MSA
124051277 5270 Rosid View MSA
123620094 5271 Pentapetalae View MSA
122654511 5272 Eudicot View MSA
120937608 5274 Embryophyte View MSA
122978090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain