Gene : Thecc1EG007220 T. cacao v1.1
Defline:  (1 of 2) PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED Genomic Order:  1113
Name:  ? Thecc1EG007220 Secondary Identifier:  ? PAC:27462005
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007220 0.5kb upstream 0.5kb upstream 2729 true scaffold_2: 5863380-5866108 Theobroma cacao
Thecc1EG007220 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5863380-5863879 Theobroma cacao
Thecc1EG007220 0.5kb downstream 0.5kb downstream 2729 true scaffold_2: 5863880-5866608 Theobroma cacao
Thecc1EG007220 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5866109-5866608 Theobroma cacao
Thecc1EG007220 1.0kb upstream 1.0kb upstream 3229 true scaffold_2: 5862880-5866108 Theobroma cacao
Thecc1EG007220 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5862880-5863879 Theobroma cacao
Thecc1EG007220 1.0kb downstream 1.0kb downstream 3229 true scaffold_2: 5863880-5867108 Theobroma cacao
Thecc1EG007220 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5866109-5867108 Theobroma cacao
Thecc1EG007220 2.0kb upstream 2.0kb upstream 4229 true scaffold_2: 5861880-5866108 Theobroma cacao
Thecc1EG007220 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5861880-5863879 Theobroma cacao
Thecc1EG007220 2.0kb downstream 2.0kb downstream 4229 true scaffold_2: 5863880-5868108 Theobroma cacao
Thecc1EG007220 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5866109-5868108 Theobroma cacao
Thecc1EG007220 5.0kb upstream 5.0kb upstream 7229 true scaffold_2: 5858880-5866108 Theobroma cacao
Thecc1EG007220 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5858880-5863879 Theobroma cacao
Thecc1EG007220 5.0kb downstream 5.0kb downstream 7229 true scaffold_2: 5863880-5871108 Theobroma cacao
Thecc1EG007220 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5866109-5871108 Theobroma cacao
Thecc1EG007220 10.0kb upstream 10.0kb upstream 12229 true scaffold_2: 5853880-5866108 Theobroma cacao
Thecc1EG007220 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5853880-5863879 Theobroma cacao
Thecc1EG007220 10.0kb downstream 10.0kb downstream 12229 true scaffold_2: 5863880-5876108 Theobroma cacao
Thecc1EG007220 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5866109-5876108 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837086 5264 Brassicales-Malvales View MSA
124344632 5266 SBM View MSA
124254066 5268 Malvidae View MSA
124070133 5270 Rosid View MSA
123748032 5271 Pentapetalae View MSA
122792151 5272 Eudicot View MSA
122043833 5273 Angiosperm View MSA
121310197 5274 Embryophyte View MSA
123347755 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain