Gene : Thecc1EG007204 T. cacao v1.1
Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  1097
Name:  ? Thecc1EG007204 Secondary Identifier:  ? PAC:27460185
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLYCLEAV-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007204 0.5kb upstream 0.5kb upstream 4329 true scaffold_2: 5778273-5782601 Theobroma cacao
Thecc1EG007204 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5782102-5782601 Theobroma cacao
Thecc1EG007204 0.5kb downstream 0.5kb downstream 4329 true scaffold_2: 5777773-5782101 Theobroma cacao
Thecc1EG007204 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5777773-5778272 Theobroma cacao
Thecc1EG007204 1.0kb upstream 1.0kb upstream 4829 true scaffold_2: 5778273-5783101 Theobroma cacao
Thecc1EG007204 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5782102-5783101 Theobroma cacao
Thecc1EG007204 1.0kb downstream 1.0kb downstream 4829 true scaffold_2: 5777273-5782101 Theobroma cacao
Thecc1EG007204 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5777273-5778272 Theobroma cacao
Thecc1EG007204 2.0kb upstream 2.0kb upstream 5829 true scaffold_2: 5778273-5784101 Theobroma cacao
Thecc1EG007204 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5782102-5784101 Theobroma cacao
Thecc1EG007204 2.0kb downstream 2.0kb downstream 5829 true scaffold_2: 5776273-5782101 Theobroma cacao
Thecc1EG007204 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5776273-5778272 Theobroma cacao
Thecc1EG007204 5.0kb upstream 5.0kb upstream 8829 true scaffold_2: 5778273-5787101 Theobroma cacao
Thecc1EG007204 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5782102-5787101 Theobroma cacao
Thecc1EG007204 5.0kb downstream 5.0kb downstream 8829 true scaffold_2: 5773273-5782101 Theobroma cacao
Thecc1EG007204 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5773273-5778272 Theobroma cacao
Thecc1EG007204 10.0kb upstream 10.0kb upstream 13829 true scaffold_2: 5778273-5792101 Theobroma cacao
Thecc1EG007204 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5782102-5792101 Theobroma cacao
Thecc1EG007204 10.0kb downstream 10.0kb downstream 13829 true scaffold_2: 5768273-5782101 Theobroma cacao
Thecc1EG007204 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5768273-5778272 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829010 5264 Brassicales-Malvales View MSA
124339794 5266 SBM View MSA
124244031 5268 Malvidae View MSA
124066911 5270 Rosid View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain