Gene : Thecc1EG007201 T. cacao v1.1
Defline:  (1 of 2) PTHR11785:SF338 - POLYAMINE TRANSPORTER RMV1 Genomic Order:  1094
Name:  ? Thecc1EG007201 Secondary Identifier:  ? PAC:27462232
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007201 0.5kb upstream 0.5kb upstream 4741 true scaffold_2: 5774614-5779354 Theobroma cacao
Thecc1EG007201 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5778855-5779354 Theobroma cacao
Thecc1EG007201 0.5kb downstream 0.5kb downstream 4741 true scaffold_2: 5774114-5778854 Theobroma cacao
Thecc1EG007201 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5774114-5774613 Theobroma cacao
Thecc1EG007201 1.0kb upstream 1.0kb upstream 5241 true scaffold_2: 5774614-5779854 Theobroma cacao
Thecc1EG007201 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5778855-5779854 Theobroma cacao
Thecc1EG007201 1.0kb downstream 1.0kb downstream 5241 true scaffold_2: 5773614-5778854 Theobroma cacao
Thecc1EG007201 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5773614-5774613 Theobroma cacao
Thecc1EG007201 2.0kb upstream 2.0kb upstream 6241 true scaffold_2: 5774614-5780854 Theobroma cacao
Thecc1EG007201 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5778855-5780854 Theobroma cacao
Thecc1EG007201 2.0kb downstream 2.0kb downstream 6241 true scaffold_2: 5772614-5778854 Theobroma cacao
Thecc1EG007201 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5772614-5774613 Theobroma cacao
Thecc1EG007201 5.0kb upstream 5.0kb upstream 9241 true scaffold_2: 5774614-5783854 Theobroma cacao
Thecc1EG007201 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5778855-5783854 Theobroma cacao
Thecc1EG007201 5.0kb downstream 5.0kb downstream 9241 true scaffold_2: 5769614-5778854 Theobroma cacao
Thecc1EG007201 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5769614-5774613 Theobroma cacao
Thecc1EG007201 10.0kb upstream 10.0kb upstream 14241 true scaffold_2: 5774614-5788854 Theobroma cacao
Thecc1EG007201 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5778855-5788854 Theobroma cacao
Thecc1EG007201 10.0kb downstream 10.0kb downstream 14241 true scaffold_2: 5764614-5778854 Theobroma cacao
Thecc1EG007201 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5764614-5774613 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834558 5264 Brassicales-Malvales View MSA
124340418 5266 SBM View MSA
124251423 5268 Malvidae View MSA
124068047 5270 Rosid View MSA
123738563 5271 Pentapetalae View MSA
122792232 5272 Eudicot View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain