Gene : Thecc1EG007154 T. cacao v1.1

Defline:  (1 of 3) PTHR33321//PTHR33321:SF2 - FAMILY NOT NAMED // BASIC SECRETORY PROTEIN FAMILY PROTEIN Genomic Order:  1054
Name:  ? Thecc1EG007154 Secondary Identifier:  ? PAC:27460171

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007154 0.5kb upstream 0.5kb upstream 3477 true scaffold_2: 5558506-5561982 Theobroma cacao
Thecc1EG007154 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5561483-5561982 Theobroma cacao
Thecc1EG007154 0.5kb downstream 0.5kb downstream 3477 true scaffold_2: 5558006-5561482 Theobroma cacao
Thecc1EG007154 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5558006-5558505 Theobroma cacao
Thecc1EG007154 1.0kb upstream 1.0kb upstream 3977 true scaffold_2: 5558506-5562482 Theobroma cacao
Thecc1EG007154 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5561483-5562482 Theobroma cacao
Thecc1EG007154 1.0kb downstream 1.0kb downstream 3977 true scaffold_2: 5557506-5561482 Theobroma cacao
Thecc1EG007154 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5557506-5558505 Theobroma cacao
Thecc1EG007154 2.0kb upstream 2.0kb upstream 4977 true scaffold_2: 5558506-5563482 Theobroma cacao
Thecc1EG007154 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5561483-5563482 Theobroma cacao
Thecc1EG007154 2.0kb downstream 2.0kb downstream 4977 true scaffold_2: 5556506-5561482 Theobroma cacao
Thecc1EG007154 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5556506-5558505 Theobroma cacao
Thecc1EG007154 5.0kb upstream 5.0kb upstream 7977 true scaffold_2: 5558506-5566482 Theobroma cacao
Thecc1EG007154 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5561483-5566482 Theobroma cacao
Thecc1EG007154 5.0kb downstream 5.0kb downstream 7977 true scaffold_2: 5553506-5561482 Theobroma cacao
Thecc1EG007154 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5553506-5558505 Theobroma cacao
Thecc1EG007154 10.0kb upstream 10.0kb upstream 12977 true scaffold_2: 5558506-5571482 Theobroma cacao
Thecc1EG007154 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5561483-5571482 Theobroma cacao
Thecc1EG007154 10.0kb downstream 10.0kb downstream 12977 true scaffold_2: 5548506-5561482 Theobroma cacao
Thecc1EG007154 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5548506-5558505 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027901 5273 Angiosperm View MSA
123826681 5264 Brassicales-Malvales View MSA
124321140 5266 SBM View MSA
124249023 5268 Malvidae View MSA
123952308 5270 Rosid View MSA
123749990 5271 Pentapetalae View MSA
122773402 5272 Eudicot View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain