Gene : Thecc1EG007143 T. cacao v1.1
Defline:  (1 of 1) PTHR11079:SF58 - RNA PSEUDOURIDINE SYNTHASE 4, MITOCHONDRIAL Genomic Order:  1043
Name:  ? Thecc1EG007143 Secondary Identifier:  ? PAC:27461906
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007143 0.5kb upstream 0.5kb upstream 4372 true scaffold_2: 5504707-5509078 Theobroma cacao
Thecc1EG007143 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5508579-5509078 Theobroma cacao
Thecc1EG007143 0.5kb downstream 0.5kb downstream 4372 true scaffold_2: 5504207-5508578 Theobroma cacao
Thecc1EG007143 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5504207-5504706 Theobroma cacao
Thecc1EG007143 1.0kb upstream 1.0kb upstream 4872 true scaffold_2: 5504707-5509578 Theobroma cacao
Thecc1EG007143 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5508579-5509578 Theobroma cacao
Thecc1EG007143 1.0kb downstream 1.0kb downstream 4872 true scaffold_2: 5503707-5508578 Theobroma cacao
Thecc1EG007143 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5503707-5504706 Theobroma cacao
Thecc1EG007143 2.0kb upstream 2.0kb upstream 5872 true scaffold_2: 5504707-5510578 Theobroma cacao
Thecc1EG007143 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5508579-5510578 Theobroma cacao
Thecc1EG007143 2.0kb downstream 2.0kb downstream 5872 true scaffold_2: 5502707-5508578 Theobroma cacao
Thecc1EG007143 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5502707-5504706 Theobroma cacao
Thecc1EG007143 5.0kb upstream 5.0kb upstream 8872 true scaffold_2: 5504707-5513578 Theobroma cacao
Thecc1EG007143 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5508579-5513578 Theobroma cacao
Thecc1EG007143 5.0kb downstream 5.0kb downstream 8872 true scaffold_2: 5499707-5508578 Theobroma cacao
Thecc1EG007143 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5499707-5504706 Theobroma cacao
Thecc1EG007143 10.0kb upstream 10.0kb upstream 13872 true scaffold_2: 5504707-5518578 Theobroma cacao
Thecc1EG007143 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5508579-5518578 Theobroma cacao
Thecc1EG007143 10.0kb downstream 10.0kb downstream 13872 true scaffold_2: 5494707-5508578 Theobroma cacao
Thecc1EG007143 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5494707-5504706 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830900 5264 Brassicales-Malvales View MSA
124338997 5266 SBM View MSA
124240525 5268 Malvidae View MSA
124062896 5270 Rosid View MSA
123739402 5271 Pentapetalae View MSA
122789155 5272 Eudicot View MSA
122044884 5273 Angiosperm View MSA
121348863 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain