Gene : Thecc1EG007288 T. cacao v1.1
Defline:  (1 of 3) K12670 - oligosaccharyltransferase complex subunit beta (WBP1) Genomic Order:  1174
Name:  ? Thecc1EG007288 Secondary Identifier:  ? PAC:27463073
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007288 0.5kb upstream 0.5kb upstream 4786 true scaffold_2: 6196806-6201591 Theobroma cacao
Thecc1EG007288 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6201092-6201591 Theobroma cacao
Thecc1EG007288 0.5kb downstream 0.5kb downstream 4786 true scaffold_2: 6196306-6201091 Theobroma cacao
Thecc1EG007288 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6196306-6196805 Theobroma cacao
Thecc1EG007288 1.0kb upstream 1.0kb upstream 5286 true scaffold_2: 6196806-6202091 Theobroma cacao
Thecc1EG007288 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6201092-6202091 Theobroma cacao
Thecc1EG007288 1.0kb downstream 1.0kb downstream 5286 true scaffold_2: 6195806-6201091 Theobroma cacao
Thecc1EG007288 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6195806-6196805 Theobroma cacao
Thecc1EG007288 2.0kb upstream 2.0kb upstream 6286 true scaffold_2: 6196806-6203091 Theobroma cacao
Thecc1EG007288 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6201092-6203091 Theobroma cacao
Thecc1EG007288 2.0kb downstream 2.0kb downstream 6286 true scaffold_2: 6194806-6201091 Theobroma cacao
Thecc1EG007288 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6194806-6196805 Theobroma cacao
Thecc1EG007288 5.0kb upstream 5.0kb upstream 9286 true scaffold_2: 6196806-6206091 Theobroma cacao
Thecc1EG007288 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6201092-6206091 Theobroma cacao
Thecc1EG007288 5.0kb downstream 5.0kb downstream 9286 true scaffold_2: 6191806-6201091 Theobroma cacao
Thecc1EG007288 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6191806-6196805 Theobroma cacao
Thecc1EG007288 10.0kb upstream 10.0kb upstream 14286 true scaffold_2: 6196806-6211091 Theobroma cacao
Thecc1EG007288 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6201092-6211091 Theobroma cacao
Thecc1EG007288 10.0kb downstream 10.0kb downstream 14286 true scaffold_2: 6186806-6201091 Theobroma cacao
Thecc1EG007288 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6186806-6196805 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840413 5264 Brassicales-Malvales View MSA
124344226 5266 SBM View MSA
124247082 5268 Malvidae View MSA
124068275 5270 Rosid View MSA
123750728 5271 Pentapetalae View MSA
122793398 5272 Eudicot View MSA
122043093 5273 Angiosperm View MSA
121346216 5274 Embryophyte View MSA
123424757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain