Gene : Thecc1EG007538 T. cacao v1.1
Defline:  (1 of 1) PTHR31827//PTHR31827:SF1 - FAMILY NOT NAMED // EMB|CAB89363.1 Genomic Order:  1374
Name:  ? Thecc1EG007538 Secondary Identifier:  ? PAC:27464702
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007538 0.5kb upstream 0.5kb upstream 5433 true scaffold_2: 7554686-7560118 Theobroma cacao
Thecc1EG007538 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7554686-7555185 Theobroma cacao
Thecc1EG007538 0.5kb downstream 0.5kb downstream 5433 true scaffold_2: 7555186-7560618 Theobroma cacao
Thecc1EG007538 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7560119-7560618 Theobroma cacao
Thecc1EG007538 1.0kb upstream 1.0kb upstream 5933 true scaffold_2: 7554186-7560118 Theobroma cacao
Thecc1EG007538 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7554186-7555185 Theobroma cacao
Thecc1EG007538 1.0kb downstream 1.0kb downstream 5933 true scaffold_2: 7555186-7561118 Theobroma cacao
Thecc1EG007538 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7560119-7561118 Theobroma cacao
Thecc1EG007538 2.0kb upstream 2.0kb upstream 6933 true scaffold_2: 7553186-7560118 Theobroma cacao
Thecc1EG007538 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7553186-7555185 Theobroma cacao
Thecc1EG007538 2.0kb downstream 2.0kb downstream 6933 true scaffold_2: 7555186-7562118 Theobroma cacao
Thecc1EG007538 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7560119-7562118 Theobroma cacao
Thecc1EG007538 5.0kb upstream 5.0kb upstream 9933 true scaffold_2: 7550186-7560118 Theobroma cacao
Thecc1EG007538 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7550186-7555185 Theobroma cacao
Thecc1EG007538 5.0kb downstream 5.0kb downstream 9933 true scaffold_2: 7555186-7565118 Theobroma cacao
Thecc1EG007538 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7560119-7565118 Theobroma cacao
Thecc1EG007538 10.0kb upstream 10.0kb upstream 14933 true scaffold_2: 7545186-7560118 Theobroma cacao
Thecc1EG007538 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7545186-7555185 Theobroma cacao
Thecc1EG007538 10.0kb downstream 10.0kb downstream 14933 true scaffold_2: 7555186-7570118 Theobroma cacao
Thecc1EG007538 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7560119-7570118 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041326 5273 Angiosperm View MSA
123831602 5264 Brassicales-Malvales View MSA
124343040 5266 SBM View MSA
124251102 5268 Malvidae View MSA
124067147 5270 Rosid View MSA
123737045 5271 Pentapetalae View MSA
122789501 5272 Eudicot View MSA
121351095 5274 Embryophyte View MSA
123426398 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain